Gene : Phvul.007G056000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12725//PTHR12725:SF81 - HALOACID DEHALOGENASE-LIKE HYDROLASE // SUBFAMILY NOT NAMED Genomic Order:  560
Name:  ? Phvul.007G056000 Secondary Identifier:  ? PAC:37164082
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Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5381 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5695 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6596 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6606 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6608 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7185 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7204 Phaseolus vulgaris pathologic  
Pvulgaris SALVADEHYPOX-PWY Phaseolus vulgaris pathologic  
Pvulgaris URSIN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G056000 0.5kb upstream 0.5kb upstream 2825 true Chr07: 4670049-4672873 Phaseolus vulgaris
Phvul.007G056000 0.5kb upstream 0.5kb upstream 500 false Chr07: 4672374-4672873 Phaseolus vulgaris
Phvul.007G056000 0.5kb downstream 0.5kb downstream 2825 true Chr07: 4669549-4672373 Phaseolus vulgaris
Phvul.007G056000 0.5kb downstream 0.5kb downstream 500 false Chr07: 4669549-4670048 Phaseolus vulgaris
Phvul.007G056000 1.0kb upstream 1.0kb upstream 3325 true Chr07: 4670049-4673373 Phaseolus vulgaris
Phvul.007G056000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4672374-4673373 Phaseolus vulgaris
Phvul.007G056000 1.0kb downstream 1.0kb downstream 3325 true Chr07: 4669049-4672373 Phaseolus vulgaris
Phvul.007G056000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4669049-4670048 Phaseolus vulgaris
Phvul.007G056000 2.0kb upstream 2.0kb upstream 4325 true Chr07: 4670049-4674373 Phaseolus vulgaris
Phvul.007G056000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4672374-4674373 Phaseolus vulgaris
Phvul.007G056000 2.0kb downstream 2.0kb downstream 4325 true Chr07: 4668049-4672373 Phaseolus vulgaris
Phvul.007G056000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4668049-4670048 Phaseolus vulgaris
Phvul.007G056000 5.0kb upstream 5.0kb upstream 7325 true Chr07: 4670049-4677373 Phaseolus vulgaris
Phvul.007G056000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4672374-4677373 Phaseolus vulgaris
Phvul.007G056000 5.0kb downstream 5.0kb downstream 7325 true Chr07: 4665049-4672373 Phaseolus vulgaris
Phvul.007G056000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4665049-4670048 Phaseolus vulgaris
Phvul.007G056000 10.0kb upstream 10.0kb upstream 12325 true Chr07: 4670049-4682373 Phaseolus vulgaris
Phvul.007G056000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4672374-4682373 Phaseolus vulgaris
Phvul.007G056000 10.0kb downstream 10.0kb downstream 12325 true Chr07: 4660049-4672373 Phaseolus vulgaris
Phvul.007G056000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4660049-4670048 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309216 5265 Fabidae View MSA
124062962 5270 Rosid View MSA
123740146 5271 Pentapetalae View MSA
122790968 5272 Eudicot View MSA
122048898 5273 Angiosperm View MSA
121311158 5274 Embryophyte View MSA
123426890 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 311.581 0.0 1508.41 High  
cufflinks 149.683 0.0 619.024 High  
cufflinks 38.1966 0.0 130.527    
cufflinks 209.005 0.0 990.262 High  
cufflinks 637.943 0.0 4308.16 High  
cufflinks 0.243451 0.0 0.980698 Low Low
cufflinks 75.3353 0.0 276.761 High  
cufflinks 213.795 0.0 860.967 High  
cufflinks 415.546 0.0 2240.96 High  
cufflinks 255.986 0.0 1130.68 High  
cufflinks 50.0761 0.0 155.204 High  

0 Strain