Gene : Phvul.007G056600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10638:SF40 - AMINE OXIDASE Genomic Order:  566
Name:  ? Phvul.007G056600 Secondary Identifier:  ? PAC:37166437
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G056600 0.5kb upstream 0.5kb upstream 3123 true Chr07: 4757238-4760360 Phaseolus vulgaris
Phvul.007G056600 0.5kb upstream 0.5kb upstream 500 false Chr07: 4759861-4760360 Phaseolus vulgaris
Phvul.007G056600 0.5kb downstream 0.5kb downstream 3123 true Chr07: 4756738-4759860 Phaseolus vulgaris
Phvul.007G056600 0.5kb downstream 0.5kb downstream 500 false Chr07: 4756738-4757237 Phaseolus vulgaris
Phvul.007G056600 1.0kb upstream 1.0kb upstream 3623 true Chr07: 4757238-4760860 Phaseolus vulgaris
Phvul.007G056600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4759861-4760860 Phaseolus vulgaris
Phvul.007G056600 1.0kb downstream 1.0kb downstream 3623 true Chr07: 4756238-4759860 Phaseolus vulgaris
Phvul.007G056600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4756238-4757237 Phaseolus vulgaris
Phvul.007G056600 2.0kb upstream 2.0kb upstream 4623 true Chr07: 4757238-4761860 Phaseolus vulgaris
Phvul.007G056600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4759861-4761860 Phaseolus vulgaris
Phvul.007G056600 2.0kb downstream 2.0kb downstream 4623 true Chr07: 4755238-4759860 Phaseolus vulgaris
Phvul.007G056600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4755238-4757237 Phaseolus vulgaris
Phvul.007G056600 5.0kb upstream 5.0kb upstream 7623 true Chr07: 4757238-4764860 Phaseolus vulgaris
Phvul.007G056600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4759861-4764860 Phaseolus vulgaris
Phvul.007G056600 5.0kb downstream 5.0kb downstream 7623 true Chr07: 4752238-4759860 Phaseolus vulgaris
Phvul.007G056600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4752238-4757237 Phaseolus vulgaris
Phvul.007G056600 10.0kb upstream 10.0kb upstream 12623 true Chr07: 4757238-4769860 Phaseolus vulgaris
Phvul.007G056600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4759861-4769860 Phaseolus vulgaris
Phvul.007G056600 10.0kb downstream 10.0kb downstream 12623 true Chr07: 4747238-4759860 Phaseolus vulgaris
Phvul.007G056600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4747238-4757237 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304899 5265 Fabidae View MSA
124072120 5270 Rosid View MSA
123747865 5271 Pentapetalae View MSA
122787372 5272 Eudicot View MSA
122049910 5273 Angiosperm View MSA
123428923 5275 Viridiplantae View MSA
121349913 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.138129 0.0 0.549948 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.495746 0.0 1.77361 Low  
cufflinks 0.13761 0.0 0.551704 Low  
cufflinks 2.95489 0.0 8.73449   High
cufflinks 0.104824 0.0 0.42598 Low Low
cufflinks 1.42557 0.0 4.53116    
cufflinks 0.212265 0.0 0.812602 Low  
cufflinks 4.32197 0.0 12.1714   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.65347 0.0 5.2086    

0 Strain