Gene : Phvul.007G061200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31351:SF4 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MWI23-RELATED Genomic Order:  615
Name:  ? Phvul.007G061200 Secondary Identifier:  ? PAC:37167441
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G061200 0.5kb upstream 0.5kb upstream 4147 true Chr07: 5384710-5388856 Phaseolus vulgaris
Phvul.007G061200 0.5kb upstream 0.5kb upstream 500 false Chr07: 5384710-5385209 Phaseolus vulgaris
Phvul.007G061200 0.5kb downstream 0.5kb downstream 4147 true Chr07: 5385210-5389356 Phaseolus vulgaris
Phvul.007G061200 0.5kb downstream 0.5kb downstream 500 false Chr07: 5388857-5389356 Phaseolus vulgaris
Phvul.007G061200 1.0kb upstream 1.0kb upstream 4647 true Chr07: 5384210-5388856 Phaseolus vulgaris
Phvul.007G061200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 5384210-5385209 Phaseolus vulgaris
Phvul.007G061200 1.0kb downstream 1.0kb downstream 4647 true Chr07: 5385210-5389856 Phaseolus vulgaris
Phvul.007G061200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 5388857-5389856 Phaseolus vulgaris
Phvul.007G061200 2.0kb upstream 2.0kb upstream 5647 true Chr07: 5383210-5388856 Phaseolus vulgaris
Phvul.007G061200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 5383210-5385209 Phaseolus vulgaris
Phvul.007G061200 2.0kb downstream 2.0kb downstream 5647 true Chr07: 5385210-5390856 Phaseolus vulgaris
Phvul.007G061200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 5388857-5390856 Phaseolus vulgaris
Phvul.007G061200 5.0kb upstream 5.0kb upstream 8647 true Chr07: 5380210-5388856 Phaseolus vulgaris
Phvul.007G061200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 5380210-5385209 Phaseolus vulgaris
Phvul.007G061200 5.0kb downstream 5.0kb downstream 8647 true Chr07: 5385210-5393856 Phaseolus vulgaris
Phvul.007G061200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 5388857-5393856 Phaseolus vulgaris
Phvul.007G061200 10.0kb upstream 10.0kb upstream 13647 true Chr07: 5375210-5388856 Phaseolus vulgaris
Phvul.007G061200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 5375210-5385209 Phaseolus vulgaris
Phvul.007G061200 10.0kb downstream 10.0kb downstream 13647 true Chr07: 5385210-5398856 Phaseolus vulgaris
Phvul.007G061200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 5388857-5398856 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311433 5265 Fabidae View MSA
124060539 5270 Rosid View MSA
123746535 5271 Pentapetalae View MSA
122785782 5272 Eudicot View MSA
122047623 5273 Angiosperm View MSA
121348921 5274 Embryophyte View MSA
123381080 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.5029 0.0 55.655    
cufflinks 23.5273 0.0 75.7489    
cufflinks 35.0548 0.0 117.001   High
cufflinks 14.2595 0.0 45.4613    
cufflinks 15.9276 0.0 50.7907    
cufflinks 27.5831 0.0 90.0856    
cufflinks 4.41277 0.0 16.3044    
cufflinks 2.21959 0.0 8.56517   Low
cufflinks 2.4673 0.0 10.5748   Low
cufflinks 6.41537 0.0 22.3638    
cufflinks 16.5787 0.0 52.9364    

0 Strain