Gene : Phvul.007G058500 P. vulgaris v2.1
Defline:  (1 of 4) PTHR33044:SF23 - BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED Genomic Order:  585
Name:  ? Phvul.007G058500 Secondary Identifier:  ? PAC:37167145
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G058500 0.5kb upstream 0.5kb upstream 1894 true Chr07: 4946912-4948805 Phaseolus vulgaris
Phvul.007G058500 0.5kb upstream 0.5kb upstream 500 false Chr07: 4948306-4948805 Phaseolus vulgaris
Phvul.007G058500 0.5kb downstream 0.5kb downstream 1894 true Chr07: 4946412-4948305 Phaseolus vulgaris
Phvul.007G058500 0.5kb downstream 0.5kb downstream 500 false Chr07: 4946412-4946911 Phaseolus vulgaris
Phvul.007G058500 1.0kb upstream 1.0kb upstream 2394 true Chr07: 4946912-4949305 Phaseolus vulgaris
Phvul.007G058500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4948306-4949305 Phaseolus vulgaris
Phvul.007G058500 1.0kb downstream 1.0kb downstream 2394 true Chr07: 4945912-4948305 Phaseolus vulgaris
Phvul.007G058500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4945912-4946911 Phaseolus vulgaris
Phvul.007G058500 2.0kb upstream 2.0kb upstream 3394 true Chr07: 4946912-4950305 Phaseolus vulgaris
Phvul.007G058500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4948306-4950305 Phaseolus vulgaris
Phvul.007G058500 2.0kb downstream 2.0kb downstream 3394 true Chr07: 4944912-4948305 Phaseolus vulgaris
Phvul.007G058500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4944912-4946911 Phaseolus vulgaris
Phvul.007G058500 5.0kb upstream 5.0kb upstream 6394 true Chr07: 4946912-4953305 Phaseolus vulgaris
Phvul.007G058500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4948306-4953305 Phaseolus vulgaris
Phvul.007G058500 5.0kb downstream 5.0kb downstream 6394 true Chr07: 4941912-4948305 Phaseolus vulgaris
Phvul.007G058500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4941912-4946911 Phaseolus vulgaris
Phvul.007G058500 10.0kb upstream 10.0kb upstream 11394 true Chr07: 4946912-4958305 Phaseolus vulgaris
Phvul.007G058500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4948306-4958305 Phaseolus vulgaris
Phvul.007G058500 10.0kb downstream 10.0kb downstream 11394 true Chr07: 4936912-4948305 Phaseolus vulgaris
Phvul.007G058500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4936912-4946911 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254770 5265 Fabidae View MSA
124071841 5270 Rosid View MSA
123750457 5271 Pentapetalae View MSA
122796784 5272 Eudicot View MSA
122044405 5273 Angiosperm View MSA
121350962 5274 Embryophyte View MSA
123381949 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.4228 0.0 108.774 High High
cufflinks 3.20217 0.0 15.043    
cufflinks 0.205649 0.0 0.866584 Low Low
cufflinks 29.7582 0.0 97.4833   High
cufflinks 3.05261 0.0 14.6066    
cufflinks 3.6866 0.0 16.679    
cufflinks 11.1304 0.0 37.8606    
cufflinks 7.72069 0.0 28.7922    
cufflinks 7.31355 0.0 27.4523    
cufflinks 2.62887 0.0 13.0336    
cufflinks 2.88323 0.0 14.0016    

0 Strain