Gene : Phvul.007G061700 P. vulgaris v2.1
Defline:  (1 of 1) 1.13.11.53 - Acireductone dioxygenase (Ni(2+)-requiring) / E-2 Genomic Order:  620
Name:  ? Phvul.007G061700 Secondary Identifier:  ? PAC:37165594
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-4361 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5389 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7270 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7528 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G061700 0.5kb upstream 0.5kb upstream 4020 true Chr07: 5445946-5449965 Phaseolus vulgaris
Phvul.007G061700 0.5kb upstream 0.5kb upstream 500 false Chr07: 5445946-5446445 Phaseolus vulgaris
Phvul.007G061700 0.5kb downstream 0.5kb downstream 4020 true Chr07: 5446446-5450465 Phaseolus vulgaris
Phvul.007G061700 0.5kb downstream 0.5kb downstream 500 false Chr07: 5449966-5450465 Phaseolus vulgaris
Phvul.007G061700 1.0kb upstream 1.0kb upstream 4520 true Chr07: 5445446-5449965 Phaseolus vulgaris
Phvul.007G061700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 5445446-5446445 Phaseolus vulgaris
Phvul.007G061700 1.0kb downstream 1.0kb downstream 4520 true Chr07: 5446446-5450965 Phaseolus vulgaris
Phvul.007G061700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 5449966-5450965 Phaseolus vulgaris
Phvul.007G061700 2.0kb upstream 2.0kb upstream 5520 true Chr07: 5444446-5449965 Phaseolus vulgaris
Phvul.007G061700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 5444446-5446445 Phaseolus vulgaris
Phvul.007G061700 2.0kb downstream 2.0kb downstream 5520 true Chr07: 5446446-5451965 Phaseolus vulgaris
Phvul.007G061700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 5449966-5451965 Phaseolus vulgaris
Phvul.007G061700 5.0kb upstream 5.0kb upstream 8520 true Chr07: 5441446-5449965 Phaseolus vulgaris
Phvul.007G061700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 5441446-5446445 Phaseolus vulgaris
Phvul.007G061700 5.0kb downstream 5.0kb downstream 8520 true Chr07: 5446446-5454965 Phaseolus vulgaris
Phvul.007G061700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 5449966-5454965 Phaseolus vulgaris
Phvul.007G061700 10.0kb upstream 10.0kb upstream 13520 true Chr07: 5436446-5449965 Phaseolus vulgaris
Phvul.007G061700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 5436446-5446445 Phaseolus vulgaris
Phvul.007G061700 10.0kb downstream 10.0kb downstream 13520 true Chr07: 5446446-5459965 Phaseolus vulgaris
Phvul.007G061700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 5449966-5459965 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312275 5265 Fabidae View MSA
124070123 5270 Rosid View MSA
123741202 5271 Pentapetalae View MSA
122793339 5272 Eudicot View MSA
122046510 5273 Angiosperm View MSA
121343851 5274 Embryophyte View MSA
123424670 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 435.15 0.0 1933.08 High High
cufflinks 125.088 0.0 467.562 High  
cufflinks 100.043 0.0 345.764 High  
cufflinks 339.417 0.0 1531.79 High High
cufflinks 108.934 0.0 385.147 High  
cufflinks 67.9407 0.0 190.71 High Low
cufflinks 95.26 0.0 327.735 High  
cufflinks 84.1548 0.0 284.138 High  
cufflinks 117.232 0.0 415.495 High  
cufflinks 238.836 0.0 1017.74 High  
cufflinks 142.839 0.0 537.331 High  

0 Strain