Gene : Phvul.007G043900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED Genomic Order:  436
Name:  ? Phvul.007G043900 Secondary Identifier:  ? PAC:37165774
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G043900 0.5kb upstream 0.5kb upstream 5393 true Chr07: 3553350-3558742 Phaseolus vulgaris
Phvul.007G043900 0.5kb upstream 0.5kb upstream 500 false Chr07: 3553350-3553849 Phaseolus vulgaris
Phvul.007G043900 0.5kb downstream 0.5kb downstream 5393 true Chr07: 3553850-3559242 Phaseolus vulgaris
Phvul.007G043900 0.5kb downstream 0.5kb downstream 500 false Chr07: 3558743-3559242 Phaseolus vulgaris
Phvul.007G043900 1.0kb upstream 1.0kb upstream 5893 true Chr07: 3552850-3558742 Phaseolus vulgaris
Phvul.007G043900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3552850-3553849 Phaseolus vulgaris
Phvul.007G043900 1.0kb downstream 1.0kb downstream 5893 true Chr07: 3553850-3559742 Phaseolus vulgaris
Phvul.007G043900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3558743-3559742 Phaseolus vulgaris
Phvul.007G043900 2.0kb upstream 2.0kb upstream 6893 true Chr07: 3551850-3558742 Phaseolus vulgaris
Phvul.007G043900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3551850-3553849 Phaseolus vulgaris
Phvul.007G043900 2.0kb downstream 2.0kb downstream 6893 true Chr07: 3553850-3560742 Phaseolus vulgaris
Phvul.007G043900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3558743-3560742 Phaseolus vulgaris
Phvul.007G043900 5.0kb upstream 5.0kb upstream 9893 true Chr07: 3548850-3558742 Phaseolus vulgaris
Phvul.007G043900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3548850-3553849 Phaseolus vulgaris
Phvul.007G043900 5.0kb downstream 5.0kb downstream 9893 true Chr07: 3553850-3563742 Phaseolus vulgaris
Phvul.007G043900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3558743-3563742 Phaseolus vulgaris
Phvul.007G043900 10.0kb upstream 10.0kb upstream 14893 true Chr07: 3543850-3558742 Phaseolus vulgaris
Phvul.007G043900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3543850-3553849 Phaseolus vulgaris
Phvul.007G043900 10.0kb downstream 10.0kb downstream 14893 true Chr07: 3553850-3568742 Phaseolus vulgaris
Phvul.007G043900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3558743-3568742 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300701 5265 Fabidae View MSA
124065184 5270 Rosid View MSA
123747124 5271 Pentapetalae View MSA
122796341 5272 Eudicot View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.5434 0.0 14.6824   Low
cufflinks 9.17126 0.0 30.2624    
cufflinks 7.22935 0.0 22.1917    
cufflinks 5.5402 0.0 19.9708   Low
cufflinks 13.9425 0.0 44.4138    
cufflinks 12.6125 0.0 40.4104    
cufflinks 9.65328 0.0 31.4178    
cufflinks 7.18808 0.0 24.4427    
cufflinks 8.9122 0.0 29.4962    
cufflinks 23.5371 0.0 75.9631   High
cufflinks 16.035 0.0 50.95   High

0 Strain