Gene : Phvul.004G094100 P. vulgaris v2.1
Defline:  (1 of 3) 1.3.1.22 - 3-oxo-5-alpha-steroid 4-dehydrogenase (NADP(+)) / Cholestenone 5-alpha-reductase Genomic Order:  984
Name:  ? Phvul.004G094100 Secondary Identifier:  ? PAC:37161684
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G094100 0.5kb upstream 0.5kb upstream 3083 true Chr04: 26916795-26919877 Phaseolus vulgaris
Phvul.004G094100 0.5kb upstream 0.5kb upstream 500 false Chr04: 26916795-26917294 Phaseolus vulgaris
Phvul.004G094100 0.5kb downstream 0.5kb downstream 3083 true Chr04: 26917295-26920377 Phaseolus vulgaris
Phvul.004G094100 0.5kb downstream 0.5kb downstream 500 false Chr04: 26919878-26920377 Phaseolus vulgaris
Phvul.004G094100 1.0kb upstream 1.0kb upstream 3583 true Chr04: 26916295-26919877 Phaseolus vulgaris
Phvul.004G094100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 26916295-26917294 Phaseolus vulgaris
Phvul.004G094100 1.0kb downstream 1.0kb downstream 3583 true Chr04: 26917295-26920877 Phaseolus vulgaris
Phvul.004G094100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 26919878-26920877 Phaseolus vulgaris
Phvul.004G094100 2.0kb upstream 2.0kb upstream 4583 true Chr04: 26915295-26919877 Phaseolus vulgaris
Phvul.004G094100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 26915295-26917294 Phaseolus vulgaris
Phvul.004G094100 2.0kb downstream 2.0kb downstream 4583 true Chr04: 26917295-26921877 Phaseolus vulgaris
Phvul.004G094100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 26919878-26921877 Phaseolus vulgaris
Phvul.004G094100 5.0kb upstream 5.0kb upstream 7583 true Chr04: 26912295-26919877 Phaseolus vulgaris
Phvul.004G094100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 26912295-26917294 Phaseolus vulgaris
Phvul.004G094100 5.0kb downstream 5.0kb downstream 7583 true Chr04: 26917295-26924877 Phaseolus vulgaris
Phvul.004G094100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 26919878-26924877 Phaseolus vulgaris
Phvul.004G094100 10.0kb upstream 10.0kb upstream 12583 true Chr04: 26907295-26919877 Phaseolus vulgaris
Phvul.004G094100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 26907295-26917294 Phaseolus vulgaris
Phvul.004G094100 10.0kb downstream 10.0kb downstream 12583 true Chr04: 26917295-26929877 Phaseolus vulgaris
Phvul.004G094100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 26919878-26929877 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311323 5265 Fabidae View MSA
124060747 5270 Rosid View MSA
123751267 5271 Pentapetalae View MSA
122793833 5272 Eudicot View MSA
122045974 5273 Angiosperm View MSA
121350714 5274 Embryophyte View MSA
123428210 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.0559 0.0 113.988 High High
cufflinks 14.6206 0.0 40.3933    
cufflinks 27.7023 0.0 72.6625    
cufflinks 20.7151 0.0 55.8886    
cufflinks 9.77346 0.0 28.2166    
cufflinks 16.866 0.0 45.9939    
cufflinks 0.552753 0.0 2.1384 Low Low
cufflinks 0.550682 0.0 2.1167   Low
cufflinks 0.773655 0.0 2.92642   Low
cufflinks 3.34361 0.0 10.8531    
cufflinks 8.05847 0.0 23.8078    

0 Strain