Gene : Phvul.004G094900 P. vulgaris v2.1
Genomic Order:  977 Name:  ? Phvul.004G094900
Secondary Identifier:  ? PAC:37161604
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G094900 0.5kb upstream 0.5kb upstream 13707 true Chr04: 26750000-26763706 Phaseolus vulgaris
Phvul.004G094900 0.5kb upstream 0.5kb upstream 500 false Chr04: 26750000-26750499 Phaseolus vulgaris
Phvul.004G094900 0.5kb downstream 0.5kb downstream 13707 true Chr04: 26750500-26764206 Phaseolus vulgaris
Phvul.004G094900 0.5kb downstream 0.5kb downstream 500 false Chr04: 26763707-26764206 Phaseolus vulgaris
Phvul.004G094900 1.0kb upstream 1.0kb upstream 14207 true Chr04: 26749500-26763706 Phaseolus vulgaris
Phvul.004G094900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 26749500-26750499 Phaseolus vulgaris
Phvul.004G094900 1.0kb downstream 1.0kb downstream 14207 true Chr04: 26750500-26764706 Phaseolus vulgaris
Phvul.004G094900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 26763707-26764706 Phaseolus vulgaris
Phvul.004G094900 2.0kb upstream 2.0kb upstream 15207 true Chr04: 26748500-26763706 Phaseolus vulgaris
Phvul.004G094900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 26748500-26750499 Phaseolus vulgaris
Phvul.004G094900 2.0kb downstream 2.0kb downstream 15207 true Chr04: 26750500-26765706 Phaseolus vulgaris
Phvul.004G094900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 26763707-26765706 Phaseolus vulgaris
Phvul.004G094900 5.0kb upstream 5.0kb upstream 18207 true Chr04: 26745500-26763706 Phaseolus vulgaris
Phvul.004G094900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 26745500-26750499 Phaseolus vulgaris
Phvul.004G094900 5.0kb downstream 5.0kb downstream 18207 true Chr04: 26750500-26768706 Phaseolus vulgaris
Phvul.004G094900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 26763707-26768706 Phaseolus vulgaris
Phvul.004G094900 10.0kb upstream 10.0kb upstream 23207 true Chr04: 26740500-26763706 Phaseolus vulgaris
Phvul.004G094900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 26740500-26750499 Phaseolus vulgaris
Phvul.004G094900 10.0kb downstream 10.0kb downstream 23207 true Chr04: 26750500-26773706 Phaseolus vulgaris
Phvul.004G094900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 26763707-26773706 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303880 5265 Fabidae View MSA
124050649 5270 Rosid View MSA
123742788 5271 Pentapetalae View MSA
122795431 5272 Eudicot View MSA
122048198 5273 Angiosperm View MSA
121348221 5274 Embryophyte View MSA
123425836 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.5246 0.0 33.8242   High
cufflinks 7.28052 0.0 25.2625    
cufflinks 5.50748 0.0 20.6037    
cufflinks 8.02177 0.0 27.853    
cufflinks 4.68079 0.0 18.4557    
cufflinks 6.5769 0.0 23.5809    
cufflinks 3.37383 0.0 14.3369   Low
cufflinks 3.27148 0.0 14.562   Low
cufflinks 3.88179 0.0 16.1627    
cufflinks 8.75036 0.0 29.6407   High
cufflinks 4.42091 0.0 17.9475    

0 Strain