Gene : Phvul.007G042600 P. vulgaris v2.1
Defline:  (1 of 10) PF04788 - Protein of unknown function (DUF620) (DUF620) Genomic Order:  423
Name:  ? Phvul.007G042600 Secondary Identifier:  ? PAC:37164998
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G042600 0.5kb upstream 0.5kb upstream 3619 true Chr07: 3468709-3472327 Phaseolus vulgaris
Phvul.007G042600 0.5kb upstream 0.5kb upstream 500 false Chr07: 3468709-3469208 Phaseolus vulgaris
Phvul.007G042600 0.5kb downstream 0.5kb downstream 3619 true Chr07: 3469209-3472827 Phaseolus vulgaris
Phvul.007G042600 0.5kb downstream 0.5kb downstream 500 false Chr07: 3472328-3472827 Phaseolus vulgaris
Phvul.007G042600 1.0kb upstream 1.0kb upstream 4119 true Chr07: 3468209-3472327 Phaseolus vulgaris
Phvul.007G042600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3468209-3469208 Phaseolus vulgaris
Phvul.007G042600 1.0kb downstream 1.0kb downstream 4119 true Chr07: 3469209-3473327 Phaseolus vulgaris
Phvul.007G042600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3472328-3473327 Phaseolus vulgaris
Phvul.007G042600 2.0kb upstream 2.0kb upstream 5119 true Chr07: 3467209-3472327 Phaseolus vulgaris
Phvul.007G042600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3467209-3469208 Phaseolus vulgaris
Phvul.007G042600 2.0kb downstream 2.0kb downstream 5119 true Chr07: 3469209-3474327 Phaseolus vulgaris
Phvul.007G042600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3472328-3474327 Phaseolus vulgaris
Phvul.007G042600 5.0kb upstream 5.0kb upstream 8119 true Chr07: 3464209-3472327 Phaseolus vulgaris
Phvul.007G042600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3464209-3469208 Phaseolus vulgaris
Phvul.007G042600 5.0kb downstream 5.0kb downstream 8119 true Chr07: 3469209-3477327 Phaseolus vulgaris
Phvul.007G042600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3472328-3477327 Phaseolus vulgaris
Phvul.007G042600 10.0kb upstream 10.0kb upstream 13119 true Chr07: 3459209-3472327 Phaseolus vulgaris
Phvul.007G042600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3459209-3469208 Phaseolus vulgaris
Phvul.007G042600 10.0kb downstream 10.0kb downstream 13119 true Chr07: 3469209-3482327 Phaseolus vulgaris
Phvul.007G042600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3472328-3482327 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299033 5265 Fabidae View MSA
124061371 5270 Rosid View MSA
123742255 5271 Pentapetalae View MSA
122789434 5272 Eudicot View MSA
122043427 5273 Angiosperm View MSA
121310121 5274 Embryophyte View MSA
123347696 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.15605 0.0 19.1687   Low
cufflinks 19.9405 0.0 51.5774    
cufflinks 15.8538 0.0 41.0059    
cufflinks 9.87312 0.0 25.9123    
cufflinks 24.4751 0.0 63.6258   High
cufflinks 26.5222 0.0 69.077   High
cufflinks 12.5539 0.0 32.5691    
cufflinks 15.3087 0.0 39.5882    
cufflinks 7.73673 0.0 20.6129   Low
cufflinks 9.37001 0.0 24.6501    
cufflinks 29.3257 0.0 76.7684   High

0 Strain