Gene : Phvul.004G101300 P. vulgaris v2.1
Defline:  (1 of 1) PF11341 - Protein of unknown function (DUF3143) (DUF3143) Genomic Order:  1071
Name:  ? Phvul.004G101300 Secondary Identifier:  ? PAC:37162904
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G101300 0.5kb upstream 0.5kb upstream 3861 true Chr04: 34290829-34294689 Phaseolus vulgaris
Phvul.004G101300 0.5kb upstream 0.5kb upstream 500 false Chr04: 34290829-34291328 Phaseolus vulgaris
Phvul.004G101300 0.5kb downstream 0.5kb downstream 3861 true Chr04: 34291329-34295189 Phaseolus vulgaris
Phvul.004G101300 0.5kb downstream 0.5kb downstream 500 false Chr04: 34294690-34295189 Phaseolus vulgaris
Phvul.004G101300 1.0kb upstream 1.0kb upstream 4361 true Chr04: 34290329-34294689 Phaseolus vulgaris
Phvul.004G101300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 34290329-34291328 Phaseolus vulgaris
Phvul.004G101300 1.0kb downstream 1.0kb downstream 4361 true Chr04: 34291329-34295689 Phaseolus vulgaris
Phvul.004G101300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 34294690-34295689 Phaseolus vulgaris
Phvul.004G101300 2.0kb upstream 2.0kb upstream 5361 true Chr04: 34289329-34294689 Phaseolus vulgaris
Phvul.004G101300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 34289329-34291328 Phaseolus vulgaris
Phvul.004G101300 2.0kb downstream 2.0kb downstream 5361 true Chr04: 34291329-34296689 Phaseolus vulgaris
Phvul.004G101300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 34294690-34296689 Phaseolus vulgaris
Phvul.004G101300 5.0kb upstream 5.0kb upstream 8361 true Chr04: 34286329-34294689 Phaseolus vulgaris
Phvul.004G101300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 34286329-34291328 Phaseolus vulgaris
Phvul.004G101300 5.0kb downstream 5.0kb downstream 8361 true Chr04: 34291329-34299689 Phaseolus vulgaris
Phvul.004G101300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 34294690-34299689 Phaseolus vulgaris
Phvul.004G101300 10.0kb upstream 10.0kb upstream 13361 true Chr04: 34281329-34294689 Phaseolus vulgaris
Phvul.004G101300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 34281329-34291328 Phaseolus vulgaris
Phvul.004G101300 10.0kb downstream 10.0kb downstream 13361 true Chr04: 34291329-34304689 Phaseolus vulgaris
Phvul.004G101300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 34294690-34304689 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307483 5265 Fabidae View MSA
124064012 5270 Rosid View MSA
123737181 5271 Pentapetalae View MSA
122792714 5272 Eudicot View MSA
122044446 5273 Angiosperm View MSA
121347894 5274 Embryophyte View MSA
123380669 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.50546 0.0 27.6022    
cufflinks 20.8664 0.0 56.572    
cufflinks 31.2913 0.0 82.1768   High
cufflinks 11.6928 0.0 33.163    
cufflinks 12.7402 0.0 35.8228    
cufflinks 20.3471 0.0 55.2179    
cufflinks 4.08535 0.0 13.031   Low
cufflinks 4.52653 0.0 14.3661   Low
cufflinks 3.92121 0.0 12.6306   Low
cufflinks 14.2532 0.0 39.9509    
cufflinks 10.2024 0.0 29.4342    

0 Strain