Gene : Phvul.007G048300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31062:SF37 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 10-RELATED Genomic Order:  481
Name:  ? Phvul.007G048300 Secondary Identifier:  ? PAC:37166985
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G048300 0.5kb upstream 0.5kb upstream 2058 true Chr07: 3960059-3962116 Phaseolus vulgaris
Phvul.007G048300 0.5kb upstream 0.5kb upstream 500 false Chr07: 3960059-3960558 Phaseolus vulgaris
Phvul.007G048300 0.5kb downstream 0.5kb downstream 2058 true Chr07: 3960559-3962616 Phaseolus vulgaris
Phvul.007G048300 0.5kb downstream 0.5kb downstream 500 false Chr07: 3962117-3962616 Phaseolus vulgaris
Phvul.007G048300 1.0kb upstream 1.0kb upstream 2558 true Chr07: 3959559-3962116 Phaseolus vulgaris
Phvul.007G048300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3959559-3960558 Phaseolus vulgaris
Phvul.007G048300 1.0kb downstream 1.0kb downstream 2558 true Chr07: 3960559-3963116 Phaseolus vulgaris
Phvul.007G048300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3962117-3963116 Phaseolus vulgaris
Phvul.007G048300 2.0kb upstream 2.0kb upstream 3558 true Chr07: 3958559-3962116 Phaseolus vulgaris
Phvul.007G048300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3958559-3960558 Phaseolus vulgaris
Phvul.007G048300 2.0kb downstream 2.0kb downstream 3558 true Chr07: 3960559-3964116 Phaseolus vulgaris
Phvul.007G048300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3962117-3964116 Phaseolus vulgaris
Phvul.007G048300 5.0kb upstream 5.0kb upstream 6558 true Chr07: 3955559-3962116 Phaseolus vulgaris
Phvul.007G048300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3955559-3960558 Phaseolus vulgaris
Phvul.007G048300 5.0kb downstream 5.0kb downstream 6558 true Chr07: 3960559-3967116 Phaseolus vulgaris
Phvul.007G048300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3962117-3967116 Phaseolus vulgaris
Phvul.007G048300 10.0kb upstream 10.0kb upstream 11558 true Chr07: 3950559-3962116 Phaseolus vulgaris
Phvul.007G048300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3950559-3960558 Phaseolus vulgaris
Phvul.007G048300 10.0kb downstream 10.0kb downstream 11558 true Chr07: 3960559-3972116 Phaseolus vulgaris
Phvul.007G048300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3962117-3972116 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304629 5265 Fabidae View MSA
124063882 5270 Rosid View MSA
123746772 5271 Pentapetalae View MSA
122790854 5272 Eudicot View MSA
122043588 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.288495 0.0 1.15812 Low  
cufflinks 0.329899 0.0 1.31082 Low  
cufflinks 0.276579 0.0 1.11348 Low  
cufflinks 0.870506 0.0 3.21488    
cufflinks 1.58138 0.0 5.52425   High
cufflinks 0.163726 0.0 0.688181 Low Low
cufflinks 0.876924 0.0 3.21534    
cufflinks 0.154674 0.0 0.652168 Low Low
cufflinks 1.39826 0.0 4.90438   High
cufflinks 0.190304 0.0 0.792785 Low Low
cufflinks 1.39964 0.0 4.94247   High

0 Strain