Gene : Phvul.007G048400 P. vulgaris v2.1
Defline:  (1 of 1) PF15370 - Domain of unknown function (DUF4598) (DUF4598) Genomic Order:  482
Name:  ? Phvul.007G048400 Secondary Identifier:  ? PAC:37164665
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G048400 0.5kb upstream 0.5kb upstream 2779 true Chr07: 3962624-3965402 Phaseolus vulgaris
Phvul.007G048400 0.5kb upstream 0.5kb upstream 500 false Chr07: 3962624-3963123 Phaseolus vulgaris
Phvul.007G048400 0.5kb downstream 0.5kb downstream 2779 true Chr07: 3963124-3965902 Phaseolus vulgaris
Phvul.007G048400 0.5kb downstream 0.5kb downstream 500 false Chr07: 3965403-3965902 Phaseolus vulgaris
Phvul.007G048400 1.0kb upstream 1.0kb upstream 3279 true Chr07: 3962124-3965402 Phaseolus vulgaris
Phvul.007G048400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3962124-3963123 Phaseolus vulgaris
Phvul.007G048400 1.0kb downstream 1.0kb downstream 3279 true Chr07: 3963124-3966402 Phaseolus vulgaris
Phvul.007G048400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3965403-3966402 Phaseolus vulgaris
Phvul.007G048400 2.0kb upstream 2.0kb upstream 4279 true Chr07: 3961124-3965402 Phaseolus vulgaris
Phvul.007G048400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3961124-3963123 Phaseolus vulgaris
Phvul.007G048400 2.0kb downstream 2.0kb downstream 4279 true Chr07: 3963124-3967402 Phaseolus vulgaris
Phvul.007G048400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3965403-3967402 Phaseolus vulgaris
Phvul.007G048400 5.0kb upstream 5.0kb upstream 7279 true Chr07: 3958124-3965402 Phaseolus vulgaris
Phvul.007G048400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3958124-3963123 Phaseolus vulgaris
Phvul.007G048400 5.0kb downstream 5.0kb downstream 7279 true Chr07: 3963124-3970402 Phaseolus vulgaris
Phvul.007G048400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3965403-3970402 Phaseolus vulgaris
Phvul.007G048400 10.0kb upstream 10.0kb upstream 12279 true Chr07: 3953124-3965402 Phaseolus vulgaris
Phvul.007G048400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3953124-3963123 Phaseolus vulgaris
Phvul.007G048400 10.0kb downstream 10.0kb downstream 12279 true Chr07: 3963124-3975402 Phaseolus vulgaris
Phvul.007G048400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3965403-3975402 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300696 5265 Fabidae View MSA
124050437 5270 Rosid View MSA
123745056 5271 Pentapetalae View MSA
122789352 5272 Eudicot View MSA
122046773 5273 Angiosperm View MSA
121350324 5274 Embryophyte View MSA
123426876 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.08199 0.0 23.2182    
cufflinks 10.8773 0.0 30.4711    
cufflinks 4.3259 0.0 13.35   Low
cufflinks 5.35838 0.0 16.3416   Low
cufflinks 11.2807 0.0 31.6616    
cufflinks 5.22665 0.0 15.8136   Low
cufflinks 11.81 0.0 32.8086   High
cufflinks 11.0275 0.0 30.6943    
cufflinks 7.7515 0.0 22.4783    
cufflinks 7.21864 0.0 21.1148    
cufflinks 12.0469 0.0 33.5663   High

0 Strain