Gene : Phvul.004G104600 P. vulgaris v2.1
Defline:  (1 of 2) K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Genomic Order:  1039
Name:  ? Phvul.004G104600 Secondary Identifier:  ? PAC:37162422
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G104600 0.5kb upstream 0.5kb upstream 5871 true Chr04: 32474174-32480044 Phaseolus vulgaris
Phvul.004G104600 0.5kb upstream 0.5kb upstream 500 false Chr04: 32474174-32474673 Phaseolus vulgaris
Phvul.004G104600 0.5kb downstream 0.5kb downstream 5871 true Chr04: 32474674-32480544 Phaseolus vulgaris
Phvul.004G104600 0.5kb downstream 0.5kb downstream 500 false Chr04: 32480045-32480544 Phaseolus vulgaris
Phvul.004G104600 1.0kb upstream 1.0kb upstream 6371 true Chr04: 32473674-32480044 Phaseolus vulgaris
Phvul.004G104600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 32473674-32474673 Phaseolus vulgaris
Phvul.004G104600 1.0kb downstream 1.0kb downstream 6371 true Chr04: 32474674-32481044 Phaseolus vulgaris
Phvul.004G104600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 32480045-32481044 Phaseolus vulgaris
Phvul.004G104600 2.0kb upstream 2.0kb upstream 7371 true Chr04: 32472674-32480044 Phaseolus vulgaris
Phvul.004G104600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 32472674-32474673 Phaseolus vulgaris
Phvul.004G104600 2.0kb downstream 2.0kb downstream 7371 true Chr04: 32474674-32482044 Phaseolus vulgaris
Phvul.004G104600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 32480045-32482044 Phaseolus vulgaris
Phvul.004G104600 5.0kb upstream 5.0kb upstream 10371 true Chr04: 32469674-32480044 Phaseolus vulgaris
Phvul.004G104600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 32469674-32474673 Phaseolus vulgaris
Phvul.004G104600 5.0kb downstream 5.0kb downstream 10371 true Chr04: 32474674-32485044 Phaseolus vulgaris
Phvul.004G104600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 32480045-32485044 Phaseolus vulgaris
Phvul.004G104600 10.0kb upstream 10.0kb upstream 15371 true Chr04: 32464674-32480044 Phaseolus vulgaris
Phvul.004G104600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 32464674-32474673 Phaseolus vulgaris
Phvul.004G104600 10.0kb downstream 10.0kb downstream 15371 true Chr04: 32474674-32490044 Phaseolus vulgaris
Phvul.004G104600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 32480045-32490044 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301587 5265 Fabidae View MSA
124060578 5270 Rosid View MSA
123738666 5271 Pentapetalae View MSA
122791362 5272 Eudicot View MSA
122047508 5273 Angiosperm View MSA
121345317 5274 Embryophyte View MSA
123426836 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 93.2212 0.0 334.102 High High
cufflinks 67.0604 0.0 225.15 High  
cufflinks 46.456 0.0 149.984 High  
cufflinks 69.5849 0.0 233.868 High  
cufflinks 40.5508 0.0 129.768 High Low
cufflinks 53.0252 0.0 172.848 High  
cufflinks 48.4898 0.0 158.053 High  
cufflinks 45.258 0.0 145.864 High  
cufflinks 62.7159 0.0 209.888 High  
cufflinks 64.1497 0.0 213.588 High  
cufflinks 58.5568 0.0 191.707 High  

0 Strain