Gene : Phvul.004G101700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11817:SF2 - PLASTIDIAL PYRUVATE KINASE 2 Genomic Order:  1075
Name:  ? Phvul.004G101700 Secondary Identifier:  ? PAC:37163873
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ANAEROFRUCAT-PWY Phaseolus vulgaris pathologic  
Pvulgaris ANAGLYCOLYSIS-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-1042 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5464 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5723 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G101700 0.5kb upstream 0.5kb upstream 6592 true Chr04: 34524956-34531547 Phaseolus vulgaris
Phvul.004G101700 0.5kb upstream 0.5kb upstream 500 false Chr04: 34524956-34525455 Phaseolus vulgaris
Phvul.004G101700 0.5kb downstream 0.5kb downstream 6592 true Chr04: 34525456-34532047 Phaseolus vulgaris
Phvul.004G101700 0.5kb downstream 0.5kb downstream 500 false Chr04: 34531548-34532047 Phaseolus vulgaris
Phvul.004G101700 1.0kb upstream 1.0kb upstream 7092 true Chr04: 34524456-34531547 Phaseolus vulgaris
Phvul.004G101700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 34524456-34525455 Phaseolus vulgaris
Phvul.004G101700 1.0kb downstream 1.0kb downstream 7092 true Chr04: 34525456-34532547 Phaseolus vulgaris
Phvul.004G101700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 34531548-34532547 Phaseolus vulgaris
Phvul.004G101700 2.0kb upstream 2.0kb upstream 8092 true Chr04: 34523456-34531547 Phaseolus vulgaris
Phvul.004G101700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 34523456-34525455 Phaseolus vulgaris
Phvul.004G101700 2.0kb downstream 2.0kb downstream 8092 true Chr04: 34525456-34533547 Phaseolus vulgaris
Phvul.004G101700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 34531548-34533547 Phaseolus vulgaris
Phvul.004G101700 5.0kb upstream 5.0kb upstream 11092 true Chr04: 34520456-34531547 Phaseolus vulgaris
Phvul.004G101700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 34520456-34525455 Phaseolus vulgaris
Phvul.004G101700 5.0kb downstream 5.0kb downstream 11092 true Chr04: 34525456-34536547 Phaseolus vulgaris
Phvul.004G101700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 34531548-34536547 Phaseolus vulgaris
Phvul.004G101700 10.0kb upstream 10.0kb upstream 16092 true Chr04: 34515456-34531547 Phaseolus vulgaris
Phvul.004G101700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 34515456-34525455 Phaseolus vulgaris
Phvul.004G101700 10.0kb downstream 10.0kb downstream 16092 true Chr04: 34525456-34541547 Phaseolus vulgaris
Phvul.004G101700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 34531548-34541547 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311327 5265 Fabidae View MSA
124063008 5270 Rosid View MSA
123740915 5271 Pentapetalae View MSA
122789254 5272 Eudicot View MSA
122043860 5273 Angiosperm View MSA
121350965 5274 Embryophyte View MSA
123423965 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.9292 0.0 36.1657    
cufflinks 24.152 0.0 62.5789    
cufflinks 13.8453 0.0 35.9292    
cufflinks 35.551 0.0 93.1421 High  
cufflinks 18.5858 0.0 48.0545    
cufflinks 29.9345 0.0 78.11    
cufflinks 25.3907 0.0 65.8957    
cufflinks 30.4876 0.0 79.6984 High  
cufflinks 40.4024 0.0 107.142 High High
cufflinks 6.23742 0.0 17.0673   Low
cufflinks 23.3118 0.0 60.326    

0 Strain