Gene : Phvul.004G101800 P. vulgaris v2.1
Defline:  (1 of 2) K10733 - GINS complex subunit 2 (GINS2, PSF2) Genomic Order:  1076
Name:  ? Phvul.004G101800 Secondary Identifier:  ? PAC:37162670
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G101800 0.5kb upstream 0.5kb upstream 2880 true Chr04: 34709054-34711933 Phaseolus vulgaris
Phvul.004G101800 0.5kb upstream 0.5kb upstream 500 false Chr04: 34709054-34709553 Phaseolus vulgaris
Phvul.004G101800 0.5kb downstream 0.5kb downstream 2880 true Chr04: 34709554-34712433 Phaseolus vulgaris
Phvul.004G101800 0.5kb downstream 0.5kb downstream 500 false Chr04: 34711934-34712433 Phaseolus vulgaris
Phvul.004G101800 1.0kb upstream 1.0kb upstream 3380 true Chr04: 34708554-34711933 Phaseolus vulgaris
Phvul.004G101800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 34708554-34709553 Phaseolus vulgaris
Phvul.004G101800 1.0kb downstream 1.0kb downstream 3380 true Chr04: 34709554-34712933 Phaseolus vulgaris
Phvul.004G101800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 34711934-34712933 Phaseolus vulgaris
Phvul.004G101800 2.0kb upstream 2.0kb upstream 4380 true Chr04: 34707554-34711933 Phaseolus vulgaris
Phvul.004G101800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 34707554-34709553 Phaseolus vulgaris
Phvul.004G101800 2.0kb downstream 2.0kb downstream 4380 true Chr04: 34709554-34713933 Phaseolus vulgaris
Phvul.004G101800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 34711934-34713933 Phaseolus vulgaris
Phvul.004G101800 5.0kb upstream 5.0kb upstream 7380 true Chr04: 34704554-34711933 Phaseolus vulgaris
Phvul.004G101800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 34704554-34709553 Phaseolus vulgaris
Phvul.004G101800 5.0kb downstream 5.0kb downstream 7380 true Chr04: 34709554-34716933 Phaseolus vulgaris
Phvul.004G101800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 34711934-34716933 Phaseolus vulgaris
Phvul.004G101800 10.0kb upstream 10.0kb upstream 12380 true Chr04: 34699554-34711933 Phaseolus vulgaris
Phvul.004G101800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 34699554-34709553 Phaseolus vulgaris
Phvul.004G101800 10.0kb downstream 10.0kb downstream 12380 true Chr04: 34709554-34721933 Phaseolus vulgaris
Phvul.004G101800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 34711934-34721933 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122785658 5272 Eudicot View MSA
122251650 5265 Fabidae Singleton cluster - no MSA
124064851 5270 Rosid View MSA
123738779 5271 Pentapetalae View MSA
122047700 5273 Angiosperm View MSA
121347474 5274 Embryophyte View MSA
123427862 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.191754 0.0 0.87012 Low  
cufflinks 0.114031 0.0 0.544995 Low  
cufflinks 0.0885144 0.0 0.432786 Low  
cufflinks 0.244888 0.0 1.08393 Low High
cufflinks 0.0435933 0.0 0.233587 Low Low
cufflinks 0.0747103 0.0 0.373568 Low  
cufflinks 0.122491 0.0 0.579929 Low  
cufflinks 0.109688 0.0 0.52507 Low  
cufflinks 0.231586 0.0 1.03006 Low High
cufflinks 0.026118 0.0 0.14914 Low Low
cufflinks 0.0661048 0.0 0.336554 Low  

0 Strain