Gene : Phvul.007G034300 P. vulgaris v2.1
Defline:  (1 of 1) K03118 - sec-independent protein translocase protein TatC (tatC) Genomic Order:  341
Name:  ? Phvul.007G034300 Secondary Identifier:  ? PAC:37166693
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G034300 0.5kb upstream 0.5kb upstream 4182 true Chr07: 2808361-2812542 Phaseolus vulgaris
Phvul.007G034300 0.5kb upstream 0.5kb upstream 500 false Chr07: 2808361-2808860 Phaseolus vulgaris
Phvul.007G034300 0.5kb downstream 0.5kb downstream 4182 true Chr07: 2808861-2813042 Phaseolus vulgaris
Phvul.007G034300 0.5kb downstream 0.5kb downstream 500 false Chr07: 2812543-2813042 Phaseolus vulgaris
Phvul.007G034300 1.0kb upstream 1.0kb upstream 4682 true Chr07: 2807861-2812542 Phaseolus vulgaris
Phvul.007G034300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 2807861-2808860 Phaseolus vulgaris
Phvul.007G034300 1.0kb downstream 1.0kb downstream 4682 true Chr07: 2808861-2813542 Phaseolus vulgaris
Phvul.007G034300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 2812543-2813542 Phaseolus vulgaris
Phvul.007G034300 2.0kb upstream 2.0kb upstream 5682 true Chr07: 2806861-2812542 Phaseolus vulgaris
Phvul.007G034300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 2806861-2808860 Phaseolus vulgaris
Phvul.007G034300 2.0kb downstream 2.0kb downstream 5682 true Chr07: 2808861-2814542 Phaseolus vulgaris
Phvul.007G034300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 2812543-2814542 Phaseolus vulgaris
Phvul.007G034300 5.0kb upstream 5.0kb upstream 8682 true Chr07: 2803861-2812542 Phaseolus vulgaris
Phvul.007G034300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 2803861-2808860 Phaseolus vulgaris
Phvul.007G034300 5.0kb downstream 5.0kb downstream 8682 true Chr07: 2808861-2817542 Phaseolus vulgaris
Phvul.007G034300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 2812543-2817542 Phaseolus vulgaris
Phvul.007G034300 10.0kb upstream 10.0kb upstream 13682 true Chr07: 2798861-2812542 Phaseolus vulgaris
Phvul.007G034300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 2798861-2808860 Phaseolus vulgaris
Phvul.007G034300 10.0kb downstream 10.0kb downstream 13682 true Chr07: 2808861-2822542 Phaseolus vulgaris
Phvul.007G034300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 2812543-2822542 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040890 5273 Angiosperm View MSA
122303582 5265 Fabidae View MSA
124063955 5270 Rosid View MSA
123743752 5271 Pentapetalae View MSA
122793561 5272 Eudicot View MSA
121345503 5274 Embryophyte View MSA
123424505 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.8634 0.0 148.662 High High
cufflinks 14.3829 0.0 38.5666    
cufflinks 78.9233 0.0 210.565 High High
cufflinks 15.0607 0.0 40.3531    
cufflinks 12.6816 0.0 34.4409    
cufflinks 27.0665 0.0 70.1697    
cufflinks 4.74068 0.0 14.1705   Low
cufflinks 4.15182 0.0 12.5687   Low
cufflinks 4.87105 0.0 14.5386   Low
cufflinks 14.9487 0.0 39.9272    
cufflinks 9.88149 0.0 27.4011    

0 Strain