Gene : Phvul.004G084494 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10133:SF38 - 5'-3' EXONUCLEASE FAMILY PROTEIN Genomic Order:  914
Name:  ? Phvul.004G084494 Secondary Identifier:  ? PAC:37163181
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G084494 0.5kb upstream 0.5kb upstream 11656 true Chr04: 20377583-20389238 Phaseolus vulgaris
Phvul.004G084494 0.5kb upstream 0.5kb upstream 500 false Chr04: 20388739-20389238 Phaseolus vulgaris
Phvul.004G084494 0.5kb downstream 0.5kb downstream 11656 true Chr04: 20377083-20388738 Phaseolus vulgaris
Phvul.004G084494 0.5kb downstream 0.5kb downstream 500 false Chr04: 20377083-20377582 Phaseolus vulgaris
Phvul.004G084494 1.0kb upstream 1.0kb upstream 12156 true Chr04: 20377583-20389738 Phaseolus vulgaris
Phvul.004G084494 1.0kb upstream 1.0kb upstream 1000 false Chr04: 20388739-20389738 Phaseolus vulgaris
Phvul.004G084494 1.0kb downstream 1.0kb downstream 12156 true Chr04: 20376583-20388738 Phaseolus vulgaris
Phvul.004G084494 1.0kb downstream 1.0kb downstream 1000 false Chr04: 20376583-20377582 Phaseolus vulgaris
Phvul.004G084494 2.0kb upstream 2.0kb upstream 13156 true Chr04: 20377583-20390738 Phaseolus vulgaris
Phvul.004G084494 2.0kb upstream 2.0kb upstream 2000 false Chr04: 20388739-20390738 Phaseolus vulgaris
Phvul.004G084494 2.0kb downstream 2.0kb downstream 13156 true Chr04: 20375583-20388738 Phaseolus vulgaris
Phvul.004G084494 2.0kb downstream 2.0kb downstream 2000 false Chr04: 20375583-20377582 Phaseolus vulgaris
Phvul.004G084494 5.0kb upstream 5.0kb upstream 16156 true Chr04: 20377583-20393738 Phaseolus vulgaris
Phvul.004G084494 5.0kb upstream 5.0kb upstream 5000 false Chr04: 20388739-20393738 Phaseolus vulgaris
Phvul.004G084494 5.0kb downstream 5.0kb downstream 16156 true Chr04: 20372583-20388738 Phaseolus vulgaris
Phvul.004G084494 5.0kb downstream 5.0kb downstream 5000 false Chr04: 20372583-20377582 Phaseolus vulgaris
Phvul.004G084494 10.0kb upstream 10.0kb upstream 21156 true Chr04: 20377583-20398738 Phaseolus vulgaris
Phvul.004G084494 10.0kb upstream 10.0kb upstream 10000 false Chr04: 20388739-20398738 Phaseolus vulgaris
Phvul.004G084494 10.0kb downstream 10.0kb downstream 21156 true Chr04: 20367583-20388738 Phaseolus vulgaris
Phvul.004G084494 10.0kb downstream 10.0kb downstream 10000 false Chr04: 20367583-20377582 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041187 5273 Angiosperm View MSA
122303604 5265 Fabidae View MSA
124060703 5270 Rosid View MSA
123740404 5271 Pentapetalae View MSA
122791763 5272 Eudicot View MSA
121344159 5274 Embryophyte View MSA
123425715 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.8504 0.0 9.10345   Low
cufflinks 3.02607 0.0 15.3398    
cufflinks 1.86536 0.0 11.9289   Low
cufflinks 2.01538 0.0 11.8656    
cufflinks 2.50705 0.0 16.2011    
cufflinks 2.77029 0.0 16.5617    
cufflinks 2.09713 0.0 14.3165    
cufflinks 3.24083 0.0 20.0673    
cufflinks 2.29399 0.0 14.9391    
cufflinks 4.51323 0.0 22.6317   High
cufflinks 2.03191 0.0 12.8645    

0 Strain