Gene : Phvul.007G033800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11627:SF8 - FRUCTOSE-BISPHOSPHATE ALDOLASE 3, CHLOROPLASTIC-RELATED Genomic Order:  336
Name:  ? Phvul.007G033800 Secondary Identifier:  ? PAC:37164060
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Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ANAEROFRUCAT-PWY Phaseolus vulgaris pathologic  
Pvulgaris ANAGLYCOLYSIS-PWY Phaseolus vulgaris pathologic  
Pvulgaris CALVIN-PWY Phaseolus vulgaris pathologic  
Pvulgaris GLUCONEO-PWY Phaseolus vulgaris pathologic  
Pvulgaris PHOTOALL-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-1042 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5464 Phaseolus vulgaris pathologic  
Pvulgaris PWY66-373 Phaseolus vulgaris pathologic  
Pvulgaris SUCSYN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G033800 0.5kb upstream 0.5kb upstream 3366 true Chr07: 2744503-2747868 Phaseolus vulgaris
Phvul.007G033800 0.5kb upstream 0.5kb upstream 500 false Chr07: 2744503-2745002 Phaseolus vulgaris
Phvul.007G033800 0.5kb downstream 0.5kb downstream 3366 true Chr07: 2745003-2748368 Phaseolus vulgaris
Phvul.007G033800 0.5kb downstream 0.5kb downstream 500 false Chr07: 2747869-2748368 Phaseolus vulgaris
Phvul.007G033800 1.0kb upstream 1.0kb upstream 3866 true Chr07: 2744003-2747868 Phaseolus vulgaris
Phvul.007G033800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 2744003-2745002 Phaseolus vulgaris
Phvul.007G033800 1.0kb downstream 1.0kb downstream 3866 true Chr07: 2745003-2748868 Phaseolus vulgaris
Phvul.007G033800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 2747869-2748868 Phaseolus vulgaris
Phvul.007G033800 2.0kb upstream 2.0kb upstream 4866 true Chr07: 2743003-2747868 Phaseolus vulgaris
Phvul.007G033800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 2743003-2745002 Phaseolus vulgaris
Phvul.007G033800 2.0kb downstream 2.0kb downstream 4866 true Chr07: 2745003-2749868 Phaseolus vulgaris
Phvul.007G033800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 2747869-2749868 Phaseolus vulgaris
Phvul.007G033800 5.0kb upstream 5.0kb upstream 7866 true Chr07: 2740003-2747868 Phaseolus vulgaris
Phvul.007G033800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 2740003-2745002 Phaseolus vulgaris
Phvul.007G033800 5.0kb downstream 5.0kb downstream 7866 true Chr07: 2745003-2752868 Phaseolus vulgaris
Phvul.007G033800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 2747869-2752868 Phaseolus vulgaris
Phvul.007G033800 10.0kb upstream 10.0kb upstream 12866 true Chr07: 2735003-2747868 Phaseolus vulgaris
Phvul.007G033800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 2735003-2745002 Phaseolus vulgaris
Phvul.007G033800 10.0kb downstream 10.0kb downstream 12866 true Chr07: 2745003-2757868 Phaseolus vulgaris
Phvul.007G033800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 2747869-2757868 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303832 5265 Fabidae View MSA
124069125 5270 Rosid View MSA
123742159 5271 Pentapetalae View MSA
122788432 5272 Eudicot View MSA
122043152 5273 Angiosperm View MSA
121348633 5274 Embryophyte View MSA
123424623 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 59.1801 0.0 156.867 High  
cufflinks 51.9471 0.0 136.663 High  
cufflinks 17.7107 0.0 46.2099   Low
cufflinks 174.226 0.0 518.063 High High
cufflinks 56.5216 0.0 149.189 High  
cufflinks 41.2853 0.0 107.465 High  
cufflinks 80.2875 0.0 219.188 High  
cufflinks 51.3108 0.0 135.092 High  
cufflinks 139.968 0.0 405.696 High High
cufflinks 59.002 0.0 156.491 High  
cufflinks 81.6171 0.0 222.09 High  

0 Strain