Gene : Phvul.004G084300 P. vulgaris v2.1
Defline:  (1 of 10) PTHR10593//PTHR10593:SF27 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Genomic Order:  913
Name:  ? Phvul.004G084300 Secondary Identifier:  ? PAC:37162059
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G084300 0.5kb upstream 0.5kb upstream 3352 true Chr04: 20353145-20356496 Phaseolus vulgaris
Phvul.004G084300 0.5kb upstream 0.5kb upstream 500 false Chr04: 20355997-20356496 Phaseolus vulgaris
Phvul.004G084300 0.5kb downstream 0.5kb downstream 3352 true Chr04: 20352645-20355996 Phaseolus vulgaris
Phvul.004G084300 0.5kb downstream 0.5kb downstream 500 false Chr04: 20352645-20353144 Phaseolus vulgaris
Phvul.004G084300 1.0kb upstream 1.0kb upstream 3852 true Chr04: 20353145-20356996 Phaseolus vulgaris
Phvul.004G084300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 20355997-20356996 Phaseolus vulgaris
Phvul.004G084300 1.0kb downstream 1.0kb downstream 3852 true Chr04: 20352145-20355996 Phaseolus vulgaris
Phvul.004G084300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 20352145-20353144 Phaseolus vulgaris
Phvul.004G084300 2.0kb upstream 2.0kb upstream 4852 true Chr04: 20353145-20357996 Phaseolus vulgaris
Phvul.004G084300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 20355997-20357996 Phaseolus vulgaris
Phvul.004G084300 2.0kb downstream 2.0kb downstream 4852 true Chr04: 20351145-20355996 Phaseolus vulgaris
Phvul.004G084300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 20351145-20353144 Phaseolus vulgaris
Phvul.004G084300 5.0kb upstream 5.0kb upstream 7852 true Chr04: 20353145-20360996 Phaseolus vulgaris
Phvul.004G084300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 20355997-20360996 Phaseolus vulgaris
Phvul.004G084300 5.0kb downstream 5.0kb downstream 7852 true Chr04: 20348145-20355996 Phaseolus vulgaris
Phvul.004G084300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 20348145-20353144 Phaseolus vulgaris
Phvul.004G084300 10.0kb upstream 10.0kb upstream 12852 true Chr04: 20353145-20365996 Phaseolus vulgaris
Phvul.004G084300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 20355997-20365996 Phaseolus vulgaris
Phvul.004G084300 10.0kb downstream 10.0kb downstream 12852 true Chr04: 20343145-20355996 Phaseolus vulgaris
Phvul.004G084300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 20343145-20353144 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309425 5265 Fabidae View MSA
124065989 5270 Rosid View MSA
123750703 5271 Pentapetalae View MSA
122786021 5272 Eudicot View MSA
122049146 5273 Angiosperm View MSA
121347779 5274 Embryophyte View MSA
123380625 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.275 0.0 47.4653    
cufflinks 19.4026 0.0 50.3261    
cufflinks 16.887 0.0 43.9553    
cufflinks 12.9499 0.0 34.2806    
cufflinks 14.5195 0.0 38.2752    
cufflinks 14.4078 0.0 37.8054    
cufflinks 13.8819 0.0 36.4562    
cufflinks 9.26473 0.0 24.9723   Low
cufflinks 13.762 0.0 36.163    
cufflinks 27.3555 0.0 70.7139   High
cufflinks 20.3242 0.0 52.7338    

0 Strain