Gene : Phvul.004G089300 P. vulgaris v2.1
Defline:  (1 of 3) PTHR11200:SF128 - TYPE I INOSITOL 1,4,5-TRISPHOSPHATE 5-PHOSPHATASE 1 Genomic Order:  963
Name:  ? Phvul.004G089300 Secondary Identifier:  ? PAC:37162581
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6358 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6363 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6364 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G089300 0.5kb upstream 0.5kb upstream 11764 true Chr04: 24249096-24260859 Phaseolus vulgaris
Phvul.004G089300 0.5kb upstream 0.5kb upstream 500 false Chr04: 24249096-24249595 Phaseolus vulgaris
Phvul.004G089300 0.5kb downstream 0.5kb downstream 11764 true Chr04: 24249596-24261359 Phaseolus vulgaris
Phvul.004G089300 0.5kb downstream 0.5kb downstream 500 false Chr04: 24260860-24261359 Phaseolus vulgaris
Phvul.004G089300 1.0kb upstream 1.0kb upstream 12264 true Chr04: 24248596-24260859 Phaseolus vulgaris
Phvul.004G089300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 24248596-24249595 Phaseolus vulgaris
Phvul.004G089300 1.0kb downstream 1.0kb downstream 12264 true Chr04: 24249596-24261859 Phaseolus vulgaris
Phvul.004G089300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 24260860-24261859 Phaseolus vulgaris
Phvul.004G089300 2.0kb upstream 2.0kb upstream 13264 true Chr04: 24247596-24260859 Phaseolus vulgaris
Phvul.004G089300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 24247596-24249595 Phaseolus vulgaris
Phvul.004G089300 2.0kb downstream 2.0kb downstream 13264 true Chr04: 24249596-24262859 Phaseolus vulgaris
Phvul.004G089300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 24260860-24262859 Phaseolus vulgaris
Phvul.004G089300 5.0kb upstream 5.0kb upstream 16264 true Chr04: 24244596-24260859 Phaseolus vulgaris
Phvul.004G089300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 24244596-24249595 Phaseolus vulgaris
Phvul.004G089300 5.0kb downstream 5.0kb downstream 16264 true Chr04: 24249596-24265859 Phaseolus vulgaris
Phvul.004G089300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 24260860-24265859 Phaseolus vulgaris
Phvul.004G089300 10.0kb upstream 10.0kb upstream 21264 true Chr04: 24239596-24260859 Phaseolus vulgaris
Phvul.004G089300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 24239596-24249595 Phaseolus vulgaris
Phvul.004G089300 10.0kb downstream 10.0kb downstream 21264 true Chr04: 24249596-24270859 Phaseolus vulgaris
Phvul.004G089300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 24260860-24270859 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313344 5265 Fabidae View MSA
124064481 5270 Rosid View MSA
123740737 5271 Pentapetalae View MSA
122795494 5272 Eudicot View MSA
122042148 5273 Angiosperm View MSA
121350777 5274 Embryophyte View MSA
123427535 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.74357 0.0 6.92543   Low
cufflinks 1.93756 0.0 7.46321    
cufflinks 6.81134 0.0 23.9169   High
cufflinks 1.3191 0.0 4.76042   Low
cufflinks 4.2 0.0 14.2137    
cufflinks 3.60736 0.0 14.3425    
cufflinks 3.2072 0.0 11.0118    
cufflinks 2.4076 0.0 8.73974    
cufflinks 3.16497 0.0 11.027    
cufflinks 2.99624 0.0 10.6152    
cufflinks 4.16135 0.0 13.8277    

0 Strain