Gene : Phvul.007G035700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22504 - REPRESSOR OF RNA POLYMERASE III TRANSCRIPTION MAF1 Genomic Order:  355
Name:  ? Phvul.007G035700 Secondary Identifier:  ? PAC:37167299
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G035700 0.5kb upstream 0.5kb upstream 6463 true Chr07: 2923875-2930337 Phaseolus vulgaris
Phvul.007G035700 0.5kb upstream 0.5kb upstream 500 false Chr07: 2929838-2930337 Phaseolus vulgaris
Phvul.007G035700 0.5kb downstream 0.5kb downstream 6463 true Chr07: 2923375-2929837 Phaseolus vulgaris
Phvul.007G035700 0.5kb downstream 0.5kb downstream 500 false Chr07: 2923375-2923874 Phaseolus vulgaris
Phvul.007G035700 1.0kb upstream 1.0kb upstream 6963 true Chr07: 2923875-2930837 Phaseolus vulgaris
Phvul.007G035700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 2929838-2930837 Phaseolus vulgaris
Phvul.007G035700 1.0kb downstream 1.0kb downstream 6963 true Chr07: 2922875-2929837 Phaseolus vulgaris
Phvul.007G035700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 2922875-2923874 Phaseolus vulgaris
Phvul.007G035700 2.0kb upstream 2.0kb upstream 7963 true Chr07: 2923875-2931837 Phaseolus vulgaris
Phvul.007G035700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 2929838-2931837 Phaseolus vulgaris
Phvul.007G035700 2.0kb downstream 2.0kb downstream 7963 true Chr07: 2921875-2929837 Phaseolus vulgaris
Phvul.007G035700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 2921875-2923874 Phaseolus vulgaris
Phvul.007G035700 5.0kb upstream 5.0kb upstream 10963 true Chr07: 2923875-2934837 Phaseolus vulgaris
Phvul.007G035700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 2929838-2934837 Phaseolus vulgaris
Phvul.007G035700 5.0kb downstream 5.0kb downstream 10963 true Chr07: 2918875-2929837 Phaseolus vulgaris
Phvul.007G035700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 2918875-2923874 Phaseolus vulgaris
Phvul.007G035700 10.0kb upstream 10.0kb upstream 15963 true Chr07: 2923875-2939837 Phaseolus vulgaris
Phvul.007G035700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 2929838-2939837 Phaseolus vulgaris
Phvul.007G035700 10.0kb downstream 10.0kb downstream 15963 true Chr07: 2913875-2929837 Phaseolus vulgaris
Phvul.007G035700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 2913875-2923874 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308593 5265 Fabidae View MSA
124066988 5270 Rosid View MSA
123748418 5271 Pentapetalae View MSA
122792340 5272 Eudicot View MSA
122047316 5273 Angiosperm View MSA
121345866 5274 Embryophyte View MSA
123424535 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.47761 0.0 23.1042   High
cufflinks 4.38598 0.0 14.1114    
cufflinks 9.27222 0.0 29.4454   High
cufflinks 4.40326 0.0 14.3696    
cufflinks 2.74366 0.0 9.59114   Low
cufflinks 5.76733 0.0 18.1295    
cufflinks 3.64965 0.0 12.1835    
cufflinks 4.39491 0.0 14.035    
cufflinks 4.91924 0.0 15.6498    
cufflinks 3.44594 0.0 11.2912    
cufflinks 3.06794 0.0 10.6296   Low

0 Strain