Gene : Phvul.004G088000 P. vulgaris v2.1
Defline:  (1 of 1) K15730 - cytosolic prostaglandin-E synthase (PTGES3) Genomic Order:  834
Name:  ? Phvul.004G088000 Secondary Identifier:  ? PAC:37162130
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G088000 0.5kb upstream 0.5kb upstream 3550 true Chr04: 14518581-14522130 Phaseolus vulgaris
Phvul.004G088000 0.5kb upstream 0.5kb upstream 500 false Chr04: 14518581-14519080 Phaseolus vulgaris
Phvul.004G088000 0.5kb downstream 0.5kb downstream 3550 true Chr04: 14519081-14522630 Phaseolus vulgaris
Phvul.004G088000 0.5kb downstream 0.5kb downstream 500 false Chr04: 14522131-14522630 Phaseolus vulgaris
Phvul.004G088000 1.0kb upstream 1.0kb upstream 4050 true Chr04: 14518081-14522130 Phaseolus vulgaris
Phvul.004G088000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 14518081-14519080 Phaseolus vulgaris
Phvul.004G088000 1.0kb downstream 1.0kb downstream 4050 true Chr04: 14519081-14523130 Phaseolus vulgaris
Phvul.004G088000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 14522131-14523130 Phaseolus vulgaris
Phvul.004G088000 2.0kb upstream 2.0kb upstream 5050 true Chr04: 14517081-14522130 Phaseolus vulgaris
Phvul.004G088000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 14517081-14519080 Phaseolus vulgaris
Phvul.004G088000 2.0kb downstream 2.0kb downstream 5050 true Chr04: 14519081-14524130 Phaseolus vulgaris
Phvul.004G088000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 14522131-14524130 Phaseolus vulgaris
Phvul.004G088000 5.0kb upstream 5.0kb upstream 8050 true Chr04: 14514081-14522130 Phaseolus vulgaris
Phvul.004G088000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 14514081-14519080 Phaseolus vulgaris
Phvul.004G088000 5.0kb downstream 5.0kb downstream 8050 true Chr04: 14519081-14527130 Phaseolus vulgaris
Phvul.004G088000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 14522131-14527130 Phaseolus vulgaris
Phvul.004G088000 10.0kb upstream 10.0kb upstream 13050 true Chr04: 14509081-14522130 Phaseolus vulgaris
Phvul.004G088000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 14509081-14519080 Phaseolus vulgaris
Phvul.004G088000 10.0kb downstream 10.0kb downstream 13050 true Chr04: 14519081-14532130 Phaseolus vulgaris
Phvul.004G088000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 14522131-14532130 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311546 5265 Fabidae View MSA
124069234 5270 Rosid View MSA
123751526 5271 Pentapetalae View MSA
122794071 5272 Eudicot View MSA
122047385 5273 Angiosperm View MSA
121348717 5274 Embryophyte View MSA
123424111 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.4461 0.0 41.3864    
cufflinks 12.4935 0.0 34.0932    
cufflinks 14.0449 0.0 37.8672    
cufflinks 14.8255 0.0 40.2022    
cufflinks 10.3202 0.0 28.9148    
cufflinks 6.83894 0.0 19.699   Low
cufflinks 13.1078 0.0 35.4808    
cufflinks 18.8636 0.0 49.6473   High
cufflinks 10.0955 0.0 28.0106    
cufflinks 19.6102 0.0 51.8713   High
cufflinks 12.5613 0.0 34.4554    

0 Strain