Gene : Phvul.004G091000 P. vulgaris v2.1
Genomic Order:  1005 Name:  ? Phvul.004G091000
Secondary Identifier:  ? PAC:37161686
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G091000 0.5kb upstream 0.5kb upstream 1899 true Chr04: 29528102-29530000 Phaseolus vulgaris
Phvul.004G091000 0.5kb upstream 0.5kb upstream 500 false Chr04: 29529501-29530000 Phaseolus vulgaris
Phvul.004G091000 0.5kb downstream 0.5kb downstream 1899 true Chr04: 29527602-29529500 Phaseolus vulgaris
Phvul.004G091000 0.5kb downstream 0.5kb downstream 500 false Chr04: 29527602-29528101 Phaseolus vulgaris
Phvul.004G091000 1.0kb upstream 1.0kb upstream 2399 true Chr04: 29528102-29530500 Phaseolus vulgaris
Phvul.004G091000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 29529501-29530500 Phaseolus vulgaris
Phvul.004G091000 1.0kb downstream 1.0kb downstream 2399 true Chr04: 29527102-29529500 Phaseolus vulgaris
Phvul.004G091000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 29527102-29528101 Phaseolus vulgaris
Phvul.004G091000 2.0kb upstream 2.0kb upstream 3399 true Chr04: 29528102-29531500 Phaseolus vulgaris
Phvul.004G091000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 29529501-29531500 Phaseolus vulgaris
Phvul.004G091000 2.0kb downstream 2.0kb downstream 3399 true Chr04: 29526102-29529500 Phaseolus vulgaris
Phvul.004G091000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 29526102-29528101 Phaseolus vulgaris
Phvul.004G091000 5.0kb upstream 5.0kb upstream 6399 true Chr04: 29528102-29534500 Phaseolus vulgaris
Phvul.004G091000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 29529501-29534500 Phaseolus vulgaris
Phvul.004G091000 5.0kb downstream 5.0kb downstream 6399 true Chr04: 29523102-29529500 Phaseolus vulgaris
Phvul.004G091000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 29523102-29528101 Phaseolus vulgaris
Phvul.004G091000 10.0kb upstream 10.0kb upstream 11399 true Chr04: 29528102-29539500 Phaseolus vulgaris
Phvul.004G091000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 29529501-29539500 Phaseolus vulgaris
Phvul.004G091000 10.0kb downstream 10.0kb downstream 11399 true Chr04: 29518102-29529500 Phaseolus vulgaris
Phvul.004G091000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 29518102-29528101 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122251738 5265 Fabidae Singleton cluster - no MSA
124073278 5270 Rosid View MSA
123747414 5271 Pentapetalae View MSA
122796371 5272 Eudicot View MSA
122042623 5273 Angiosperm View MSA
121349599 5274 Embryophyte View MSA
123428775 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.71932 0.0 27.2597    
cufflinks 7.93275 0.0 25.086    
cufflinks 7.889 0.0 25.0126    
cufflinks 10.6957 0.0 32.3994   High
cufflinks 9.72406 0.0 30.186   High
cufflinks 8.21407 0.0 25.8813    
cufflinks 7.37726 0.0 23.4485    
cufflinks 6.10329 0.0 19.9922   Low
cufflinks 8.30042 0.0 25.9573    
cufflinks 8.36677 0.0 26.417    
cufflinks 9.34275 0.0 28.9811    

0 Strain