Gene : Phvul.007G041000 P. vulgaris v2.1
Defline:  (1 of 3) PF04450 - Peptidase of plants and bacteria (BSP) Genomic Order:  407
Name:  ? Phvul.007G041000 Secondary Identifier:  ? PAC:37164566
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G041000 0.5kb upstream 0.5kb upstream 1193 true Chr07: 3352299-3353491 Phaseolus vulgaris
Phvul.007G041000 0.5kb upstream 0.5kb upstream 500 false Chr07: 3352992-3353491 Phaseolus vulgaris
Phvul.007G041000 0.5kb downstream 0.5kb downstream 1193 true Chr07: 3351799-3352991 Phaseolus vulgaris
Phvul.007G041000 0.5kb downstream 0.5kb downstream 500 false Chr07: 3351799-3352298 Phaseolus vulgaris
Phvul.007G041000 1.0kb upstream 1.0kb upstream 1693 true Chr07: 3352299-3353991 Phaseolus vulgaris
Phvul.007G041000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3352992-3353991 Phaseolus vulgaris
Phvul.007G041000 1.0kb downstream 1.0kb downstream 1693 true Chr07: 3351299-3352991 Phaseolus vulgaris
Phvul.007G041000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3351299-3352298 Phaseolus vulgaris
Phvul.007G041000 2.0kb upstream 2.0kb upstream 2693 true Chr07: 3352299-3354991 Phaseolus vulgaris
Phvul.007G041000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3352992-3354991 Phaseolus vulgaris
Phvul.007G041000 2.0kb downstream 2.0kb downstream 2693 true Chr07: 3350299-3352991 Phaseolus vulgaris
Phvul.007G041000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3350299-3352298 Phaseolus vulgaris
Phvul.007G041000 5.0kb upstream 5.0kb upstream 5693 true Chr07: 3352299-3357991 Phaseolus vulgaris
Phvul.007G041000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3352992-3357991 Phaseolus vulgaris
Phvul.007G041000 5.0kb downstream 5.0kb downstream 5693 true Chr07: 3347299-3352991 Phaseolus vulgaris
Phvul.007G041000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3347299-3352298 Phaseolus vulgaris
Phvul.007G041000 10.0kb upstream 10.0kb upstream 10693 true Chr07: 3352299-3362991 Phaseolus vulgaris
Phvul.007G041000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3352992-3362991 Phaseolus vulgaris
Phvul.007G041000 10.0kb downstream 10.0kb downstream 10693 true Chr07: 3342299-3352991 Phaseolus vulgaris
Phvul.007G041000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3342299-3352298 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314822 5265 Fabidae View MSA
124062491 5270 Rosid View MSA
123748225 5271 Pentapetalae View MSA
122793503 5272 Eudicot View MSA
122049150 5273 Angiosperm View MSA
121350945 5274 Embryophyte View MSA
123381943 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 68.8319 0.0 178.014 High High
cufflinks 94.186 0.0 245.309 High High
cufflinks 5.32621 0.0 16.8008    
cufflinks 45.5187 0.0 118.325 High  
cufflinks 7.65714 0.0 23.3287    
cufflinks 25.0972 0.0 67.3972    
cufflinks 7.60662 0.0 22.8696    
cufflinks 9.12179 0.0 26.8564    
cufflinks 0.741663 0.0 2.83558   Low
cufflinks 5.99223 0.0 18.7174    
cufflinks 26.9213 0.0 72.0776    

0 Strain