Gene : Phvul.004G092182 P. vulgaris v2.1
Defline:  (1 of 13) K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1) Genomic Order:  955
Name:  ? Phvul.004G092182 Secondary Identifier:  ? PAC:37162818
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G092182 0.5kb upstream 0.5kb upstream 1447 true Chr04: 23221344-23222790 Phaseolus vulgaris
Phvul.004G092182 0.5kb upstream 0.5kb upstream 500 false Chr04: 23221344-23221843 Phaseolus vulgaris
Phvul.004G092182 0.5kb downstream 0.5kb downstream 1447 true Chr04: 23221844-23223290 Phaseolus vulgaris
Phvul.004G092182 0.5kb downstream 0.5kb downstream 500 false Chr04: 23222791-23223290 Phaseolus vulgaris
Phvul.004G092182 1.0kb upstream 1.0kb upstream 1947 true Chr04: 23220844-23222790 Phaseolus vulgaris
Phvul.004G092182 1.0kb upstream 1.0kb upstream 1000 false Chr04: 23220844-23221843 Phaseolus vulgaris
Phvul.004G092182 1.0kb downstream 1.0kb downstream 1947 true Chr04: 23221844-23223790 Phaseolus vulgaris
Phvul.004G092182 1.0kb downstream 1.0kb downstream 1000 false Chr04: 23222791-23223790 Phaseolus vulgaris
Phvul.004G092182 2.0kb upstream 2.0kb upstream 2947 true Chr04: 23219844-23222790 Phaseolus vulgaris
Phvul.004G092182 2.0kb upstream 2.0kb upstream 2000 false Chr04: 23219844-23221843 Phaseolus vulgaris
Phvul.004G092182 2.0kb downstream 2.0kb downstream 2947 true Chr04: 23221844-23224790 Phaseolus vulgaris
Phvul.004G092182 2.0kb downstream 2.0kb downstream 2000 false Chr04: 23222791-23224790 Phaseolus vulgaris
Phvul.004G092182 5.0kb upstream 5.0kb upstream 5947 true Chr04: 23216844-23222790 Phaseolus vulgaris
Phvul.004G092182 5.0kb upstream 5.0kb upstream 5000 false Chr04: 23216844-23221843 Phaseolus vulgaris
Phvul.004G092182 5.0kb downstream 5.0kb downstream 5947 true Chr04: 23221844-23227790 Phaseolus vulgaris
Phvul.004G092182 5.0kb downstream 5.0kb downstream 5000 false Chr04: 23222791-23227790 Phaseolus vulgaris
Phvul.004G092182 10.0kb upstream 10.0kb upstream 10947 true Chr04: 23211844-23222790 Phaseolus vulgaris
Phvul.004G092182 10.0kb upstream 10.0kb upstream 10000 false Chr04: 23211844-23221843 Phaseolus vulgaris
Phvul.004G092182 10.0kb downstream 10.0kb downstream 10947 true Chr04: 23221844-23232790 Phaseolus vulgaris
Phvul.004G092182 10.0kb downstream 10.0kb downstream 10000 false Chr04: 23222791-23232790 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314115 5265 Fabidae View MSA
124072480 5270 Rosid View MSA
123751711 5271 Pentapetalae View MSA
122794402 5272 Eudicot View MSA
122050341 5273 Angiosperm View MSA
121349648 5274 Embryophyte View MSA
123426313 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 146.391 0.0 405.765 High  
cufflinks 362.171 0.0 1130.52 High  
cufflinks 4243.11 0.0 24965.7 High High
cufflinks 120.457 0.0 326.994 High  
cufflinks 511.561 0.0 1735.65 High  
cufflinks 1271.37 0.0 5300.77 High  
cufflinks 0.458698 0.0 1.76896 Low Low
cufflinks 0.134874 0.0 0.577316 Low Low
cufflinks 0.513777 0.0 1.96748   Low
cufflinks 36.2922 0.0 93.9647 High  
cufflinks 244.125 0.0 721.653 High  

0 Strain