Gene : Phvul.007G038000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22814//PTHR22814:SF150 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // SUBFAMILY NOT NAMED Genomic Order:  376
Name:  ? Phvul.007G038000 Secondary Identifier:  ? PAC:37164910
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G038000 0.5kb upstream 0.5kb upstream 3056 true Chr07: 3086823-3089878 Phaseolus vulgaris
Phvul.007G038000 0.5kb upstream 0.5kb upstream 500 false Chr07: 3086823-3087322 Phaseolus vulgaris
Phvul.007G038000 0.5kb downstream 0.5kb downstream 3056 true Chr07: 3087323-3090378 Phaseolus vulgaris
Phvul.007G038000 0.5kb downstream 0.5kb downstream 500 false Chr07: 3089879-3090378 Phaseolus vulgaris
Phvul.007G038000 1.0kb upstream 1.0kb upstream 3556 true Chr07: 3086323-3089878 Phaseolus vulgaris
Phvul.007G038000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3086323-3087322 Phaseolus vulgaris
Phvul.007G038000 1.0kb downstream 1.0kb downstream 3556 true Chr07: 3087323-3090878 Phaseolus vulgaris
Phvul.007G038000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3089879-3090878 Phaseolus vulgaris
Phvul.007G038000 2.0kb upstream 2.0kb upstream 4556 true Chr07: 3085323-3089878 Phaseolus vulgaris
Phvul.007G038000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3085323-3087322 Phaseolus vulgaris
Phvul.007G038000 2.0kb downstream 2.0kb downstream 4556 true Chr07: 3087323-3091878 Phaseolus vulgaris
Phvul.007G038000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3089879-3091878 Phaseolus vulgaris
Phvul.007G038000 5.0kb upstream 5.0kb upstream 7556 true Chr07: 3082323-3089878 Phaseolus vulgaris
Phvul.007G038000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3082323-3087322 Phaseolus vulgaris
Phvul.007G038000 5.0kb downstream 5.0kb downstream 7556 true Chr07: 3087323-3094878 Phaseolus vulgaris
Phvul.007G038000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3089879-3094878 Phaseolus vulgaris
Phvul.007G038000 10.0kb upstream 10.0kb upstream 12556 true Chr07: 3077323-3089878 Phaseolus vulgaris
Phvul.007G038000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3077323-3087322 Phaseolus vulgaris
Phvul.007G038000 10.0kb downstream 10.0kb downstream 12556 true Chr07: 3087323-3099878 Phaseolus vulgaris
Phvul.007G038000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3089879-3099878 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308724 5265 Fabidae View MSA
124063089 5270 Rosid View MSA
123750327 5271 Pentapetalae View MSA
122795966 5272 Eudicot View MSA
122049430 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.68805 0.0 23.4093    
cufflinks 26.0967 0.0 67.5278    
cufflinks 49.9392 0.0 133.05 High High
cufflinks 13.2892 0.0 34.9389    
cufflinks 13.4368 0.0 35.3049    
cufflinks 58.8264 0.0 158.981 High High
cufflinks 4.52955 0.0 12.8621   Low
cufflinks 3.64811 0.0 10.5556   Low
cufflinks 3.82809 0.0 11.0655   Low
cufflinks 9.82964 0.0 26.2614    
cufflinks 18.8145 0.0 48.7321    

0 Strain