Gene : Phvul.007G038400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10177:SF251 - CYCLIN-D3-1 Genomic Order:  380
Name:  ? Phvul.007G038400 Secondary Identifier:  ? PAC:37165807
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G038400 0.5kb upstream 0.5kb upstream 2850 true Chr07: 3123859-3126708 Phaseolus vulgaris
Phvul.007G038400 0.5kb upstream 0.5kb upstream 500 false Chr07: 3123859-3124358 Phaseolus vulgaris
Phvul.007G038400 0.5kb downstream 0.5kb downstream 2850 true Chr07: 3124359-3127208 Phaseolus vulgaris
Phvul.007G038400 0.5kb downstream 0.5kb downstream 500 false Chr07: 3126709-3127208 Phaseolus vulgaris
Phvul.007G038400 1.0kb upstream 1.0kb upstream 3350 true Chr07: 3123359-3126708 Phaseolus vulgaris
Phvul.007G038400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3123359-3124358 Phaseolus vulgaris
Phvul.007G038400 1.0kb downstream 1.0kb downstream 3350 true Chr07: 3124359-3127708 Phaseolus vulgaris
Phvul.007G038400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3126709-3127708 Phaseolus vulgaris
Phvul.007G038400 2.0kb upstream 2.0kb upstream 4350 true Chr07: 3122359-3126708 Phaseolus vulgaris
Phvul.007G038400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3122359-3124358 Phaseolus vulgaris
Phvul.007G038400 2.0kb downstream 2.0kb downstream 4350 true Chr07: 3124359-3128708 Phaseolus vulgaris
Phvul.007G038400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3126709-3128708 Phaseolus vulgaris
Phvul.007G038400 5.0kb upstream 5.0kb upstream 7350 true Chr07: 3119359-3126708 Phaseolus vulgaris
Phvul.007G038400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3119359-3124358 Phaseolus vulgaris
Phvul.007G038400 5.0kb downstream 5.0kb downstream 7350 true Chr07: 3124359-3131708 Phaseolus vulgaris
Phvul.007G038400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3126709-3131708 Phaseolus vulgaris
Phvul.007G038400 10.0kb upstream 10.0kb upstream 12350 true Chr07: 3114359-3126708 Phaseolus vulgaris
Phvul.007G038400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3114359-3124358 Phaseolus vulgaris
Phvul.007G038400 10.0kb downstream 10.0kb downstream 12350 true Chr07: 3124359-3136708 Phaseolus vulgaris
Phvul.007G038400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3126709-3136708 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122051916 5273 Angiosperm View MSA
122305644 5265 Fabidae View MSA
124071465 5270 Rosid View MSA
123745263 5271 Pentapetalae View MSA
122796369 5272 Eudicot View MSA
121312796 5274 Embryophyte View MSA
123428428 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.8773 0.0 29.2387    
cufflinks 31.9402 0.0 82.6313    
cufflinks 4.92469 0.0 14.1817    
cufflinks 8.72283 0.0 23.995    
cufflinks 21.5805 0.0 55.9836    
cufflinks 81.6528 0.0 222.872 High High
cufflinks 21.6831 0.0 56.2105    
cufflinks 14.2433 0.0 37.543    
cufflinks 13.0275 0.0 34.6097    
cufflinks 0.106294 0.0 0.446455 Low Low
cufflinks 30.0631 0.0 77.7128    

0 Strain