Gene : Phvul.004G093300 P. vulgaris v2.1
Defline:  (1 of 3) 2.4.1.29 - Cellulose synthase (GDP-forming) / GDP-glucose-cellulose glucosyltransferase Genomic Order:  943
Name:  ? Phvul.004G093300 Secondary Identifier:  ? PAC:37162450
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-1001 Phaseolus vulgaris pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G093300 0.5kb upstream 0.5kb upstream 9535 true Chr04: 22192895-22202429 Phaseolus vulgaris
Phvul.004G093300 0.5kb upstream 0.5kb upstream 500 false Chr04: 22192895-22193394 Phaseolus vulgaris
Phvul.004G093300 0.5kb downstream 0.5kb downstream 9535 true Chr04: 22193395-22202929 Phaseolus vulgaris
Phvul.004G093300 0.5kb downstream 0.5kb downstream 500 false Chr04: 22202430-22202929 Phaseolus vulgaris
Phvul.004G093300 1.0kb upstream 1.0kb upstream 10035 true Chr04: 22192395-22202429 Phaseolus vulgaris
Phvul.004G093300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 22192395-22193394 Phaseolus vulgaris
Phvul.004G093300 1.0kb downstream 1.0kb downstream 10035 true Chr04: 22193395-22203429 Phaseolus vulgaris
Phvul.004G093300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 22202430-22203429 Phaseolus vulgaris
Phvul.004G093300 2.0kb upstream 2.0kb upstream 11035 true Chr04: 22191395-22202429 Phaseolus vulgaris
Phvul.004G093300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 22191395-22193394 Phaseolus vulgaris
Phvul.004G093300 2.0kb downstream 2.0kb downstream 11035 true Chr04: 22193395-22204429 Phaseolus vulgaris
Phvul.004G093300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 22202430-22204429 Phaseolus vulgaris
Phvul.004G093300 5.0kb upstream 5.0kb upstream 14035 true Chr04: 22188395-22202429 Phaseolus vulgaris
Phvul.004G093300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 22188395-22193394 Phaseolus vulgaris
Phvul.004G093300 5.0kb downstream 5.0kb downstream 14035 true Chr04: 22193395-22207429 Phaseolus vulgaris
Phvul.004G093300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 22202430-22207429 Phaseolus vulgaris
Phvul.004G093300 10.0kb upstream 10.0kb upstream 19035 true Chr04: 22183395-22202429 Phaseolus vulgaris
Phvul.004G093300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 22183395-22193394 Phaseolus vulgaris
Phvul.004G093300 10.0kb downstream 10.0kb downstream 19035 true Chr04: 22193395-22212429 Phaseolus vulgaris
Phvul.004G093300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 22202430-22212429 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253683 5265 Fabidae View MSA
124042718 5270 Rosid View MSA
123747849 5271 Pentapetalae View MSA
122795199 5272 Eudicot View MSA
122048668 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.1543 0.0 39.4153   Low
cufflinks 40.6657 0.0 113.988 High  
cufflinks 45.3249 0.0 129.257 High  
cufflinks 29.552 0.0 79.5002    
cufflinks 78.7628 0.0 238.869 High  
cufflinks 68.8364 0.0 206.798 High  
cufflinks 84.306 0.0 261.003 High  
cufflinks 37.092 0.0 103.426 High  
cufflinks 103.15 0.0 328.969 High High
cufflinks 30.6535 0.0 83.4365    
cufflinks 114.714 0.0 371.944 High High

0 Strain