Gene : Phvul.007G025500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22952:SF209 - BZIP TRANSCRIPTION FACTOR Genomic Order:  252
Name:  ? Phvul.007G025500 Secondary Identifier:  ? PAC:37165483
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G025500 0.5kb upstream 0.5kb upstream 3972 true Chr07: 1910889-1914860 Phaseolus vulgaris
Phvul.007G025500 0.5kb upstream 0.5kb upstream 500 false Chr07: 1910889-1911388 Phaseolus vulgaris
Phvul.007G025500 0.5kb downstream 0.5kb downstream 3972 true Chr07: 1911389-1915360 Phaseolus vulgaris
Phvul.007G025500 0.5kb downstream 0.5kb downstream 500 false Chr07: 1914861-1915360 Phaseolus vulgaris
Phvul.007G025500 1.0kb upstream 1.0kb upstream 4472 true Chr07: 1910389-1914860 Phaseolus vulgaris
Phvul.007G025500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1910389-1911388 Phaseolus vulgaris
Phvul.007G025500 1.0kb downstream 1.0kb downstream 4472 true Chr07: 1911389-1915860 Phaseolus vulgaris
Phvul.007G025500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1914861-1915860 Phaseolus vulgaris
Phvul.007G025500 2.0kb upstream 2.0kb upstream 5472 true Chr07: 1909389-1914860 Phaseolus vulgaris
Phvul.007G025500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1909389-1911388 Phaseolus vulgaris
Phvul.007G025500 2.0kb downstream 2.0kb downstream 5472 true Chr07: 1911389-1916860 Phaseolus vulgaris
Phvul.007G025500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1914861-1916860 Phaseolus vulgaris
Phvul.007G025500 5.0kb upstream 5.0kb upstream 8472 true Chr07: 1906389-1914860 Phaseolus vulgaris
Phvul.007G025500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1906389-1911388 Phaseolus vulgaris
Phvul.007G025500 5.0kb downstream 5.0kb downstream 8472 true Chr07: 1911389-1919860 Phaseolus vulgaris
Phvul.007G025500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1914861-1919860 Phaseolus vulgaris
Phvul.007G025500 10.0kb upstream 10.0kb upstream 13472 true Chr07: 1901389-1914860 Phaseolus vulgaris
Phvul.007G025500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1901389-1911388 Phaseolus vulgaris
Phvul.007G025500 10.0kb downstream 10.0kb downstream 13472 true Chr07: 1911389-1924860 Phaseolus vulgaris
Phvul.007G025500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1914861-1924860 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310454 5265 Fabidae View MSA
124070852 5270 Rosid View MSA
123737642 5271 Pentapetalae View MSA
122795655 5272 Eudicot View MSA
122048650 5273 Angiosperm View MSA
121349382 5274 Embryophyte View MSA
123426504 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.28083 0.0 8.04676    
cufflinks 0.741569 0.0 6.74434    
cufflinks 1.47581 0.0 8.31283    
cufflinks 1.60223 0.0 5.74106    
cufflinks 5.08819 0.0 23.3567   High
cufflinks 1.39167 0.0 9.56098    
cufflinks 1.33541 0.0 8.97877    
cufflinks 0.187278 0.0 1.42276 Low Low
cufflinks 2.76873 0.0 13.1163    
cufflinks 0.517797 0.0 4.80203   Low
cufflinks 3.83017 0.0 16.5863   High

0 Strain