Gene : Phvul.007G024100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR33057:SF1 - OVATE FAMILY PROTEIN 13 Genomic Order:  239
Name:  ? Phvul.007G024100 Secondary Identifier:  ? PAC:37164635
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G024100 0.5kb upstream 0.5kb upstream 1598 true Chr07: 1733024-1734621 Phaseolus vulgaris
Phvul.007G024100 0.5kb upstream 0.5kb upstream 500 false Chr07: 1733024-1733523 Phaseolus vulgaris
Phvul.007G024100 0.5kb downstream 0.5kb downstream 1598 true Chr07: 1733524-1735121 Phaseolus vulgaris
Phvul.007G024100 0.5kb downstream 0.5kb downstream 500 false Chr07: 1734622-1735121 Phaseolus vulgaris
Phvul.007G024100 1.0kb upstream 1.0kb upstream 2098 true Chr07: 1732524-1734621 Phaseolus vulgaris
Phvul.007G024100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1732524-1733523 Phaseolus vulgaris
Phvul.007G024100 1.0kb downstream 1.0kb downstream 2098 true Chr07: 1733524-1735621 Phaseolus vulgaris
Phvul.007G024100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1734622-1735621 Phaseolus vulgaris
Phvul.007G024100 2.0kb upstream 2.0kb upstream 3098 true Chr07: 1731524-1734621 Phaseolus vulgaris
Phvul.007G024100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1731524-1733523 Phaseolus vulgaris
Phvul.007G024100 2.0kb downstream 2.0kb downstream 3098 true Chr07: 1733524-1736621 Phaseolus vulgaris
Phvul.007G024100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1734622-1736621 Phaseolus vulgaris
Phvul.007G024100 5.0kb upstream 5.0kb upstream 6098 true Chr07: 1728524-1734621 Phaseolus vulgaris
Phvul.007G024100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1728524-1733523 Phaseolus vulgaris
Phvul.007G024100 5.0kb downstream 5.0kb downstream 6098 true Chr07: 1733524-1739621 Phaseolus vulgaris
Phvul.007G024100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1734622-1739621 Phaseolus vulgaris
Phvul.007G024100 10.0kb upstream 10.0kb upstream 11098 true Chr07: 1723524-1734621 Phaseolus vulgaris
Phvul.007G024100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1723524-1733523 Phaseolus vulgaris
Phvul.007G024100 10.0kb downstream 10.0kb downstream 11098 true Chr07: 1733524-1744621 Phaseolus vulgaris
Phvul.007G024100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1734622-1744621 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303843 5265 Fabidae View MSA
124071458 5270 Rosid View MSA
123749654 5271 Pentapetalae View MSA
122787439 5272 Eudicot View MSA
122050214 5273 Angiosperm View MSA
121311801 5274 Embryophyte View MSA
123349046 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.85408 0.0 12.2361    
cufflinks 11.2747 0.0 31.7985    
cufflinks 5.11248 0.0 15.7102    
cufflinks 24.399 0.0 64.6593   High
cufflinks 3.62349 0.0 11.6164    
cufflinks 2.33907 0.0 7.87754    
cufflinks 0.354912 0.0 1.41284 Low Low
cufflinks 0.0591993 0.0 0.277892 Low Low
cufflinks 2.54902 0.0 8.48934    
cufflinks 10.7909 0.0 30.6087    
cufflinks 3.75156 0.0 11.9726    

0 Strain