Gene : Phvul.007G026400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10621//PTHR10621:SF12 - UV EXCISION REPAIR PROTEIN RAD23 // SUBFAMILY NOT NAMED Genomic Order:  261
Name:  ? Phvul.007G026400 Secondary Identifier:  ? PAC:37166264
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G026400 0.5kb upstream 0.5kb upstream 4323 true Chr07: 1968669-1972991 Phaseolus vulgaris
Phvul.007G026400 0.5kb upstream 0.5kb upstream 500 false Chr07: 1972492-1972991 Phaseolus vulgaris
Phvul.007G026400 0.5kb downstream 0.5kb downstream 4323 true Chr07: 1968169-1972491 Phaseolus vulgaris
Phvul.007G026400 0.5kb downstream 0.5kb downstream 500 false Chr07: 1968169-1968668 Phaseolus vulgaris
Phvul.007G026400 1.0kb upstream 1.0kb upstream 4823 true Chr07: 1968669-1973491 Phaseolus vulgaris
Phvul.007G026400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1972492-1973491 Phaseolus vulgaris
Phvul.007G026400 1.0kb downstream 1.0kb downstream 4823 true Chr07: 1967669-1972491 Phaseolus vulgaris
Phvul.007G026400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1967669-1968668 Phaseolus vulgaris
Phvul.007G026400 2.0kb upstream 2.0kb upstream 5823 true Chr07: 1968669-1974491 Phaseolus vulgaris
Phvul.007G026400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1972492-1974491 Phaseolus vulgaris
Phvul.007G026400 2.0kb downstream 2.0kb downstream 5823 true Chr07: 1966669-1972491 Phaseolus vulgaris
Phvul.007G026400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1966669-1968668 Phaseolus vulgaris
Phvul.007G026400 5.0kb upstream 5.0kb upstream 8823 true Chr07: 1968669-1977491 Phaseolus vulgaris
Phvul.007G026400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1972492-1977491 Phaseolus vulgaris
Phvul.007G026400 5.0kb downstream 5.0kb downstream 8823 true Chr07: 1963669-1972491 Phaseolus vulgaris
Phvul.007G026400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1963669-1968668 Phaseolus vulgaris
Phvul.007G026400 10.0kb upstream 10.0kb upstream 13823 true Chr07: 1968669-1982491 Phaseolus vulgaris
Phvul.007G026400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1972492-1982491 Phaseolus vulgaris
Phvul.007G026400 10.0kb downstream 10.0kb downstream 13823 true Chr07: 1958669-1972491 Phaseolus vulgaris
Phvul.007G026400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1958669-1968668 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040911 5273 Angiosperm View MSA
122309404 5265 Fabidae View MSA
124061978 5270 Rosid View MSA
123736504 5271 Pentapetalae View MSA
122787573 5272 Eudicot View MSA
121350140 5274 Embryophyte View MSA
123423951 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 84.5339 0.0 232.57 High  
cufflinks 68.9001 0.0 186.195 High  
cufflinks 62.7147 0.0 168.029 High Low
cufflinks 94.5212 0.0 263.934 High High
cufflinks 82.614 0.0 226.684 High  
cufflinks 56.1659 0.0 149.253 High Low
cufflinks 73.646 0.0 200.266 High  
cufflinks 64.5365 0.0 173.125 High  
cufflinks 80.4377 0.0 220.686 High  
cufflinks 74.216 0.0 201.807 High  
cufflinks 90.8004 0.0 251.452 High High

0 Strain