Gene : Phvul.004G076500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11669:SF1 - REPLICATION FACTOR C SUBUNIT 3 Genomic Order:  798
Name:  ? Phvul.004G076500 Secondary Identifier:  ? PAC:37162508
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G076500 0.5kb upstream 0.5kb upstream 4453 true Chr04: 13306266-13310718 Phaseolus vulgaris
Phvul.004G076500 0.5kb upstream 0.5kb upstream 500 false Chr04: 13310219-13310718 Phaseolus vulgaris
Phvul.004G076500 0.5kb downstream 0.5kb downstream 4453 true Chr04: 13305766-13310218 Phaseolus vulgaris
Phvul.004G076500 0.5kb downstream 0.5kb downstream 500 false Chr04: 13305766-13306265 Phaseolus vulgaris
Phvul.004G076500 1.0kb upstream 1.0kb upstream 4953 true Chr04: 13306266-13311218 Phaseolus vulgaris
Phvul.004G076500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 13310219-13311218 Phaseolus vulgaris
Phvul.004G076500 1.0kb downstream 1.0kb downstream 4953 true Chr04: 13305266-13310218 Phaseolus vulgaris
Phvul.004G076500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 13305266-13306265 Phaseolus vulgaris
Phvul.004G076500 2.0kb upstream 2.0kb upstream 5953 true Chr04: 13306266-13312218 Phaseolus vulgaris
Phvul.004G076500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 13310219-13312218 Phaseolus vulgaris
Phvul.004G076500 2.0kb downstream 2.0kb downstream 5953 true Chr04: 13304266-13310218 Phaseolus vulgaris
Phvul.004G076500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 13304266-13306265 Phaseolus vulgaris
Phvul.004G076500 5.0kb upstream 5.0kb upstream 8953 true Chr04: 13306266-13315218 Phaseolus vulgaris
Phvul.004G076500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 13310219-13315218 Phaseolus vulgaris
Phvul.004G076500 5.0kb downstream 5.0kb downstream 8953 true Chr04: 13301266-13310218 Phaseolus vulgaris
Phvul.004G076500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 13301266-13306265 Phaseolus vulgaris
Phvul.004G076500 10.0kb upstream 10.0kb upstream 13953 true Chr04: 13306266-13320218 Phaseolus vulgaris
Phvul.004G076500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 13310219-13320218 Phaseolus vulgaris
Phvul.004G076500 10.0kb downstream 10.0kb downstream 13953 true Chr04: 13296266-13310218 Phaseolus vulgaris
Phvul.004G076500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 13296266-13306265 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313460 5265 Fabidae View MSA
124061589 5270 Rosid View MSA
123739027 5271 Pentapetalae View MSA
122788068 5272 Eudicot View MSA
122043390 5273 Angiosperm View MSA
121345700 5274 Embryophyte View MSA
123424767 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.9336 0.0 39.9183   High
cufflinks 14.6076 0.0 39.1491   High
cufflinks 9.95756 0.0 27.4672    
cufflinks 13.0494 0.0 35.4195    
cufflinks 9.14091 0.0 25.6557   Low
cufflinks 10.6036 0.0 29.1698    
cufflinks 10.7027 0.0 29.4211    
cufflinks 14.8515 0.0 39.6402   High
cufflinks 11.1307 0.0 30.511    
cufflinks 7.72301 0.0 21.914   Low
cufflinks 11.7267 0.0 32.1274    

0 Strain