Gene : Phvul.004G080900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11960:SF18 - 4EHP, ISOFORM B Genomic Order:  886
Name:  ? Phvul.004G080900 Secondary Identifier:  ? PAC:37162104
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G080900 0.5kb upstream 0.5kb upstream 3820 true Chr04: 19279548-19283367 Phaseolus vulgaris
Phvul.004G080900 0.5kb upstream 0.5kb upstream 500 false Chr04: 19279548-19280047 Phaseolus vulgaris
Phvul.004G080900 0.5kb downstream 0.5kb downstream 3820 true Chr04: 19280048-19283867 Phaseolus vulgaris
Phvul.004G080900 0.5kb downstream 0.5kb downstream 500 false Chr04: 19283368-19283867 Phaseolus vulgaris
Phvul.004G080900 1.0kb upstream 1.0kb upstream 4320 true Chr04: 19279048-19283367 Phaseolus vulgaris
Phvul.004G080900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 19279048-19280047 Phaseolus vulgaris
Phvul.004G080900 1.0kb downstream 1.0kb downstream 4320 true Chr04: 19280048-19284367 Phaseolus vulgaris
Phvul.004G080900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 19283368-19284367 Phaseolus vulgaris
Phvul.004G080900 2.0kb upstream 2.0kb upstream 5320 true Chr04: 19278048-19283367 Phaseolus vulgaris
Phvul.004G080900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 19278048-19280047 Phaseolus vulgaris
Phvul.004G080900 2.0kb downstream 2.0kb downstream 5320 true Chr04: 19280048-19285367 Phaseolus vulgaris
Phvul.004G080900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 19283368-19285367 Phaseolus vulgaris
Phvul.004G080900 5.0kb upstream 5.0kb upstream 8320 true Chr04: 19275048-19283367 Phaseolus vulgaris
Phvul.004G080900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 19275048-19280047 Phaseolus vulgaris
Phvul.004G080900 5.0kb downstream 5.0kb downstream 8320 true Chr04: 19280048-19288367 Phaseolus vulgaris
Phvul.004G080900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 19283368-19288367 Phaseolus vulgaris
Phvul.004G080900 10.0kb upstream 10.0kb upstream 13320 true Chr04: 19270048-19283367 Phaseolus vulgaris
Phvul.004G080900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 19270048-19280047 Phaseolus vulgaris
Phvul.004G080900 10.0kb downstream 10.0kb downstream 13320 true Chr04: 19280048-19293367 Phaseolus vulgaris
Phvul.004G080900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 19283368-19293367 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306467 5265 Fabidae View MSA
124061586 5270 Rosid View MSA
123751569 5271 Pentapetalae View MSA
122785682 5272 Eudicot View MSA
122047051 5273 Angiosperm View MSA
121344049 5274 Embryophyte View MSA
123379965 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.4467 0.0 112.305 High High
cufflinks 42.069 0.0 108.741 High  
cufflinks 25.6456 0.0 66.9784    
cufflinks 40.7959 0.0 105.479 High  
cufflinks 30.7676 0.0 79.9741    
cufflinks 22.0958 0.0 58.2243   Low
cufflinks 26.6941 0.0 69.6784    
cufflinks 26.8944 0.0 70.1097    
cufflinks 30.9318 0.0 80.3421 High  
cufflinks 47.8812 0.0 123.845 High High
cufflinks 34.2939 0.0 88.8526 High  

0 Strain