Gene : Phvul.004G080200 P. vulgaris v2.1
Defline:  (1 of 2) 1.4.1.2 - Glutamate dehydrogenase / Glutamic dehydrogenase Genomic Order:  879
Name:  ? Phvul.004G080200 Secondary Identifier:  ? PAC:37162341
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris GLUTAMATE-DEG1-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G080200 0.5kb upstream 0.5kb upstream 4655 true Chr04: 19010989-19015643 Phaseolus vulgaris
Phvul.004G080200 0.5kb upstream 0.5kb upstream 500 false Chr04: 19015144-19015643 Phaseolus vulgaris
Phvul.004G080200 0.5kb downstream 0.5kb downstream 4655 true Chr04: 19010489-19015143 Phaseolus vulgaris
Phvul.004G080200 0.5kb downstream 0.5kb downstream 500 false Chr04: 19010489-19010988 Phaseolus vulgaris
Phvul.004G080200 1.0kb upstream 1.0kb upstream 5155 true Chr04: 19010989-19016143 Phaseolus vulgaris
Phvul.004G080200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 19015144-19016143 Phaseolus vulgaris
Phvul.004G080200 1.0kb downstream 1.0kb downstream 5155 true Chr04: 19009989-19015143 Phaseolus vulgaris
Phvul.004G080200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 19009989-19010988 Phaseolus vulgaris
Phvul.004G080200 2.0kb upstream 2.0kb upstream 6155 true Chr04: 19010989-19017143 Phaseolus vulgaris
Phvul.004G080200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 19015144-19017143 Phaseolus vulgaris
Phvul.004G080200 2.0kb downstream 2.0kb downstream 6155 true Chr04: 19008989-19015143 Phaseolus vulgaris
Phvul.004G080200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 19008989-19010988 Phaseolus vulgaris
Phvul.004G080200 5.0kb upstream 5.0kb upstream 9155 true Chr04: 19010989-19020143 Phaseolus vulgaris
Phvul.004G080200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 19015144-19020143 Phaseolus vulgaris
Phvul.004G080200 5.0kb downstream 5.0kb downstream 9155 true Chr04: 19005989-19015143 Phaseolus vulgaris
Phvul.004G080200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 19005989-19010988 Phaseolus vulgaris
Phvul.004G080200 10.0kb upstream 10.0kb upstream 14155 true Chr04: 19010989-19025143 Phaseolus vulgaris
Phvul.004G080200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 19015144-19025143 Phaseolus vulgaris
Phvul.004G080200 10.0kb downstream 10.0kb downstream 14155 true Chr04: 19000989-19015143 Phaseolus vulgaris
Phvul.004G080200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 19000989-19010988 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313991 5265 Fabidae View MSA
124067187 5270 Rosid View MSA
123747810 5271 Pentapetalae View MSA
122788460 5272 Eudicot View MSA
122043764 5273 Angiosperm View MSA
121350758 5274 Embryophyte View MSA
123427828 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.9028 0.0 46.48   High
cufflinks 12.9363 0.0 34.0138   High
cufflinks 4.78599 0.0 13.6368    
cufflinks 15.3006 0.0 40.0642   High
cufflinks 8.85236 0.0 24.0982    
cufflinks 2.90567 0.0 8.75209   Low
cufflinks 4.37447 0.0 12.5639    
cufflinks 1.87102 0.0 5.90426   Low
cufflinks 8.6941 0.0 23.4662    
cufflinks 3.70802 0.0 10.9108    
cufflinks 3.85223 0.0 11.3136    

0 Strain