Gene : Phvul.007G028100 P. vulgaris v2.1
Defline:  (1 of 1) 2.5.1.112//2.5.1.27//2.5.1.75 - Adenylate dimethylallyltransferase (ADP/ATP-dependent) / Isopentenyltransferase // Adenylate dimethylallyltransferase (AMP-dependent) / Isopentenyltransferase // tRNA dimethylallyltransferase / tRNA prenyltransferase Genomic Order:  279
Name:  ? Phvul.007G028100 Secondary Identifier:  ? PAC:37165836
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-2681 Phaseolus vulgaris pathologic  
Pvulgaris PWY-2781 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G028100 0.5kb upstream 0.5kb upstream 2549 true Chr07: 2216573-2219121 Phaseolus vulgaris
Phvul.007G028100 0.5kb upstream 0.5kb upstream 500 false Chr07: 2216573-2217072 Phaseolus vulgaris
Phvul.007G028100 0.5kb downstream 0.5kb downstream 2549 true Chr07: 2217073-2219621 Phaseolus vulgaris
Phvul.007G028100 0.5kb downstream 0.5kb downstream 500 false Chr07: 2219122-2219621 Phaseolus vulgaris
Phvul.007G028100 1.0kb upstream 1.0kb upstream 3049 true Chr07: 2216073-2219121 Phaseolus vulgaris
Phvul.007G028100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 2216073-2217072 Phaseolus vulgaris
Phvul.007G028100 1.0kb downstream 1.0kb downstream 3049 true Chr07: 2217073-2220121 Phaseolus vulgaris
Phvul.007G028100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 2219122-2220121 Phaseolus vulgaris
Phvul.007G028100 2.0kb upstream 2.0kb upstream 4049 true Chr07: 2215073-2219121 Phaseolus vulgaris
Phvul.007G028100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 2215073-2217072 Phaseolus vulgaris
Phvul.007G028100 2.0kb downstream 2.0kb downstream 4049 true Chr07: 2217073-2221121 Phaseolus vulgaris
Phvul.007G028100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 2219122-2221121 Phaseolus vulgaris
Phvul.007G028100 5.0kb upstream 5.0kb upstream 7049 true Chr07: 2212073-2219121 Phaseolus vulgaris
Phvul.007G028100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 2212073-2217072 Phaseolus vulgaris
Phvul.007G028100 5.0kb downstream 5.0kb downstream 7049 true Chr07: 2217073-2224121 Phaseolus vulgaris
Phvul.007G028100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 2219122-2224121 Phaseolus vulgaris
Phvul.007G028100 10.0kb upstream 10.0kb upstream 12049 true Chr07: 2207073-2219121 Phaseolus vulgaris
Phvul.007G028100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 2207073-2217072 Phaseolus vulgaris
Phvul.007G028100 10.0kb downstream 10.0kb downstream 12049 true Chr07: 2217073-2229121 Phaseolus vulgaris
Phvul.007G028100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 2219122-2229121 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300556 5265 Fabidae View MSA
124061925 5270 Rosid View MSA
123742682 5271 Pentapetalae View MSA
122792550 5272 Eudicot View MSA
122046326 5273 Angiosperm View MSA
121310589 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.27579 0.0 4.15556    
cufflinks 1.82759 0.0 5.74823    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.76955 0.0 10.8753   High
cufflinks 0.139861 0.0 0.5573 Low Low
cufflinks 0.0805542 0.0 0.33859 Low Low
cufflinks 1.39222 0.0 4.46262    
cufflinks 6.41703 0.0 17.6103   High
cufflinks 0.456101 0.0 1.6553 Low  
cufflinks 0.586074 0.0 2.08365    
cufflinks 0.255445 0.0 0.972047 Low  

0 Strain