Gene : Phvul.004G080400 P. vulgaris v2.1
Defline:  (1 of 1) K00965 - UDPglucose--hexose-1-phosphate uridylyltransferase (galT, GALT) Genomic Order:  881
Name:  ? Phvul.004G080400 Secondary Identifier:  ? PAC:37161877
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G080400 0.5kb upstream 0.5kb upstream 6226 true Chr04: 19108737-19114962 Phaseolus vulgaris
Phvul.004G080400 0.5kb upstream 0.5kb upstream 500 false Chr04: 19114463-19114962 Phaseolus vulgaris
Phvul.004G080400 0.5kb downstream 0.5kb downstream 6226 true Chr04: 19108237-19114462 Phaseolus vulgaris
Phvul.004G080400 0.5kb downstream 0.5kb downstream 500 false Chr04: 19108237-19108736 Phaseolus vulgaris
Phvul.004G080400 1.0kb upstream 1.0kb upstream 6726 true Chr04: 19108737-19115462 Phaseolus vulgaris
Phvul.004G080400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 19114463-19115462 Phaseolus vulgaris
Phvul.004G080400 1.0kb downstream 1.0kb downstream 6726 true Chr04: 19107737-19114462 Phaseolus vulgaris
Phvul.004G080400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 19107737-19108736 Phaseolus vulgaris
Phvul.004G080400 2.0kb upstream 2.0kb upstream 7726 true Chr04: 19108737-19116462 Phaseolus vulgaris
Phvul.004G080400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 19114463-19116462 Phaseolus vulgaris
Phvul.004G080400 2.0kb downstream 2.0kb downstream 7726 true Chr04: 19106737-19114462 Phaseolus vulgaris
Phvul.004G080400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 19106737-19108736 Phaseolus vulgaris
Phvul.004G080400 5.0kb upstream 5.0kb upstream 10726 true Chr04: 19108737-19119462 Phaseolus vulgaris
Phvul.004G080400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 19114463-19119462 Phaseolus vulgaris
Phvul.004G080400 5.0kb downstream 5.0kb downstream 10726 true Chr04: 19103737-19114462 Phaseolus vulgaris
Phvul.004G080400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 19103737-19108736 Phaseolus vulgaris
Phvul.004G080400 10.0kb upstream 10.0kb upstream 15726 true Chr04: 19108737-19124462 Phaseolus vulgaris
Phvul.004G080400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 19114463-19124462 Phaseolus vulgaris
Phvul.004G080400 10.0kb downstream 10.0kb downstream 15726 true Chr04: 19098737-19114462 Phaseolus vulgaris
Phvul.004G080400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 19098737-19108736 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309076 5265 Fabidae View MSA
124069087 5270 Rosid View MSA
123737596 5271 Pentapetalae View MSA
122790706 5272 Eudicot View MSA
122047985 5273 Angiosperm View MSA
121344081 5274 Embryophyte View MSA
123379971 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.18007 0.0 25.4236    
cufflinks 8.24116 0.0 23.162    
cufflinks 5.81609 0.0 16.9024   Low
cufflinks 17.4247 0.0 45.9406   High
cufflinks 6.39313 0.0 18.243    
cufflinks 7.39962 0.0 21.0011    
cufflinks 6.52953 0.0 18.6577    
cufflinks 8.4861 0.0 23.6593    
cufflinks 7.57324 0.0 21.3884    
cufflinks 9.17415 0.0 25.4962    
cufflinks 6.78064 0.0 19.3647    

0 Strain