Gene : Phvul.007G031800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10788:SF48 - ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 Genomic Order:  315
Name:  ? Phvul.007G031800 Secondary Identifier:  ? PAC:37165865
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G031800 0.5kb upstream 0.5kb upstream 4915 true Chr07: 2535204-2540118 Phaseolus vulgaris
Phvul.007G031800 0.5kb upstream 0.5kb upstream 500 false Chr07: 2535204-2535703 Phaseolus vulgaris
Phvul.007G031800 0.5kb downstream 0.5kb downstream 4915 true Chr07: 2535704-2540618 Phaseolus vulgaris
Phvul.007G031800 0.5kb downstream 0.5kb downstream 500 false Chr07: 2540119-2540618 Phaseolus vulgaris
Phvul.007G031800 1.0kb upstream 1.0kb upstream 5415 true Chr07: 2534704-2540118 Phaseolus vulgaris
Phvul.007G031800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 2534704-2535703 Phaseolus vulgaris
Phvul.007G031800 1.0kb downstream 1.0kb downstream 5415 true Chr07: 2535704-2541118 Phaseolus vulgaris
Phvul.007G031800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 2540119-2541118 Phaseolus vulgaris
Phvul.007G031800 2.0kb upstream 2.0kb upstream 6415 true Chr07: 2533704-2540118 Phaseolus vulgaris
Phvul.007G031800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 2533704-2535703 Phaseolus vulgaris
Phvul.007G031800 2.0kb downstream 2.0kb downstream 6415 true Chr07: 2535704-2542118 Phaseolus vulgaris
Phvul.007G031800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 2540119-2542118 Phaseolus vulgaris
Phvul.007G031800 5.0kb upstream 5.0kb upstream 9415 true Chr07: 2530704-2540118 Phaseolus vulgaris
Phvul.007G031800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 2530704-2535703 Phaseolus vulgaris
Phvul.007G031800 5.0kb downstream 5.0kb downstream 9415 true Chr07: 2535704-2545118 Phaseolus vulgaris
Phvul.007G031800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 2540119-2545118 Phaseolus vulgaris
Phvul.007G031800 10.0kb upstream 10.0kb upstream 14415 true Chr07: 2525704-2540118 Phaseolus vulgaris
Phvul.007G031800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 2525704-2535703 Phaseolus vulgaris
Phvul.007G031800 10.0kb downstream 10.0kb downstream 14415 true Chr07: 2535704-2550118 Phaseolus vulgaris
Phvul.007G031800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 2540119-2550118 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305735 5265 Fabidae View MSA
124065335 5270 Rosid View MSA
123751102 5271 Pentapetalae View MSA
122786361 5272 Eudicot View MSA
122049755 5273 Angiosperm View MSA
121348711 5274 Embryophyte View MSA
123425695 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.33692 0.0 30.1462   Low
cufflinks 22.8342 0.0 73.6335    
cufflinks 12.564 0.0 35.787   Low
cufflinks 12.6088 0.0 39.9002   Low
cufflinks 27.1896 0.0 88.6053    
cufflinks 23.3887 0.0 75.9631    
cufflinks 52.1545 0.0 165.615 High High
cufflinks 49.2753 0.0 154.992 High High
cufflinks 25.384 0.0 82.4711    
cufflinks 50.6915 0.0 159.047 High High
cufflinks 41.4536 0.0 144.448 High  

0 Strain