Gene : Phvul.007G032000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31285:SF0 - PROMOTER OF FILAMENTATION PROTEIN 1 Genomic Order:  317
Name:  ? Phvul.007G032000 Secondary Identifier:  ? PAC:37164113
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G032000 0.5kb upstream 0.5kb upstream 5884 true Chr07: 2545451-2551334 Phaseolus vulgaris
Phvul.007G032000 0.5kb upstream 0.5kb upstream 500 false Chr07: 2550835-2551334 Phaseolus vulgaris
Phvul.007G032000 0.5kb downstream 0.5kb downstream 5884 true Chr07: 2544951-2550834 Phaseolus vulgaris
Phvul.007G032000 0.5kb downstream 0.5kb downstream 500 false Chr07: 2544951-2545450 Phaseolus vulgaris
Phvul.007G032000 1.0kb upstream 1.0kb upstream 6384 true Chr07: 2545451-2551834 Phaseolus vulgaris
Phvul.007G032000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 2550835-2551834 Phaseolus vulgaris
Phvul.007G032000 1.0kb downstream 1.0kb downstream 6384 true Chr07: 2544451-2550834 Phaseolus vulgaris
Phvul.007G032000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 2544451-2545450 Phaseolus vulgaris
Phvul.007G032000 2.0kb upstream 2.0kb upstream 7384 true Chr07: 2545451-2552834 Phaseolus vulgaris
Phvul.007G032000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 2550835-2552834 Phaseolus vulgaris
Phvul.007G032000 2.0kb downstream 2.0kb downstream 7384 true Chr07: 2543451-2550834 Phaseolus vulgaris
Phvul.007G032000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 2543451-2545450 Phaseolus vulgaris
Phvul.007G032000 5.0kb upstream 5.0kb upstream 10384 true Chr07: 2545451-2555834 Phaseolus vulgaris
Phvul.007G032000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 2550835-2555834 Phaseolus vulgaris
Phvul.007G032000 5.0kb downstream 5.0kb downstream 10384 true Chr07: 2540451-2550834 Phaseolus vulgaris
Phvul.007G032000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 2540451-2545450 Phaseolus vulgaris
Phvul.007G032000 10.0kb upstream 10.0kb upstream 15384 true Chr07: 2545451-2560834 Phaseolus vulgaris
Phvul.007G032000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 2550835-2560834 Phaseolus vulgaris
Phvul.007G032000 10.0kb downstream 10.0kb downstream 15384 true Chr07: 2535451-2550834 Phaseolus vulgaris
Phvul.007G032000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 2535451-2545450 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301977 5265 Fabidae View MSA
124066208 5270 Rosid View MSA
123737916 5271 Pentapetalae View MSA
122789184 5272 Eudicot View MSA
122047029 5273 Angiosperm View MSA
121345024 5274 Embryophyte View MSA
123425109 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.69878 0.0 32.3435   High
cufflinks 4.72908 0.0 17.3311    
cufflinks 10.3157 0.0 36.9178   High
cufflinks 4.18898 0.0 16.6271    
cufflinks 4.84282 0.0 17.3726    
cufflinks 4.96486 0.0 17.6367    
cufflinks 6.32243 0.0 25.1766    
cufflinks 6.05224 0.0 24.1073    
cufflinks 6.80875 0.0 26.747    
cufflinks 3.61054 0.0 14.6083   Low
cufflinks 4.06425 0.0 15.9044    

0 Strain