Gene : Phvul.004G082400 P. vulgaris v2.1
Genomic Order:  907 Name:  ? Phvul.004G082400
Secondary Identifier:  ? PAC:37162091
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G082400 0.5kb upstream 0.5kb upstream 4485 true Chr04: 20005958-20010442 Phaseolus vulgaris
Phvul.004G082400 0.5kb upstream 0.5kb upstream 500 false Chr04: 20009943-20010442 Phaseolus vulgaris
Phvul.004G082400 0.5kb downstream 0.5kb downstream 4485 true Chr04: 20005458-20009942 Phaseolus vulgaris
Phvul.004G082400 0.5kb downstream 0.5kb downstream 500 false Chr04: 20005458-20005957 Phaseolus vulgaris
Phvul.004G082400 1.0kb upstream 1.0kb upstream 4985 true Chr04: 20005958-20010942 Phaseolus vulgaris
Phvul.004G082400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 20009943-20010942 Phaseolus vulgaris
Phvul.004G082400 1.0kb downstream 1.0kb downstream 4985 true Chr04: 20004958-20009942 Phaseolus vulgaris
Phvul.004G082400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 20004958-20005957 Phaseolus vulgaris
Phvul.004G082400 2.0kb upstream 2.0kb upstream 5985 true Chr04: 20005958-20011942 Phaseolus vulgaris
Phvul.004G082400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 20009943-20011942 Phaseolus vulgaris
Phvul.004G082400 2.0kb downstream 2.0kb downstream 5985 true Chr04: 20003958-20009942 Phaseolus vulgaris
Phvul.004G082400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 20003958-20005957 Phaseolus vulgaris
Phvul.004G082400 5.0kb upstream 5.0kb upstream 8985 true Chr04: 20005958-20014942 Phaseolus vulgaris
Phvul.004G082400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 20009943-20014942 Phaseolus vulgaris
Phvul.004G082400 5.0kb downstream 5.0kb downstream 8985 true Chr04: 20000958-20009942 Phaseolus vulgaris
Phvul.004G082400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 20000958-20005957 Phaseolus vulgaris
Phvul.004G082400 10.0kb upstream 10.0kb upstream 13985 true Chr04: 20005958-20019942 Phaseolus vulgaris
Phvul.004G082400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 20009943-20019942 Phaseolus vulgaris
Phvul.004G082400 10.0kb downstream 10.0kb downstream 13985 true Chr04: 19995958-20009942 Phaseolus vulgaris
Phvul.004G082400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 19995958-20005957 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026208 5273 Angiosperm View MSA
122300341 5265 Fabidae View MSA
124069800 5270 Rosid View MSA
123741961 5271 Pentapetalae View MSA
122795095 5272 Eudicot View MSA
121349870 5274 Embryophyte View MSA
123381480 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0191555 0.0 0.0928073 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.111763 0.0 0.43901 Low  
cufflinks 0.0204428 0.0 0.10242 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0735831 0.0 0.300419 Low  
cufflinks 0.899429 0.0 4.0733    
cufflinks 7.95665 0.0 25.8659   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00510363 0.0 0.0375191 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain