Gene : Phvul.007G177700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22950//PTHR22950:SF279 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  1638
Name:  ? Phvul.007G177700 Secondary Identifier:  ? PAC:37164666
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G177700 0.5kb upstream 0.5kb upstream 4335 true Chr07: 29726994-29731328 Phaseolus vulgaris
Phvul.007G177700 0.5kb upstream 0.5kb upstream 500 false Chr07: 29730829-29731328 Phaseolus vulgaris
Phvul.007G177700 0.5kb downstream 0.5kb downstream 4335 true Chr07: 29726494-29730828 Phaseolus vulgaris
Phvul.007G177700 0.5kb downstream 0.5kb downstream 500 false Chr07: 29726494-29726993 Phaseolus vulgaris
Phvul.007G177700 1.0kb upstream 1.0kb upstream 4835 true Chr07: 29726994-29731828 Phaseolus vulgaris
Phvul.007G177700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 29730829-29731828 Phaseolus vulgaris
Phvul.007G177700 1.0kb downstream 1.0kb downstream 4835 true Chr07: 29725994-29730828 Phaseolus vulgaris
Phvul.007G177700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 29725994-29726993 Phaseolus vulgaris
Phvul.007G177700 2.0kb upstream 2.0kb upstream 5835 true Chr07: 29726994-29732828 Phaseolus vulgaris
Phvul.007G177700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 29730829-29732828 Phaseolus vulgaris
Phvul.007G177700 2.0kb downstream 2.0kb downstream 5835 true Chr07: 29724994-29730828 Phaseolus vulgaris
Phvul.007G177700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 29724994-29726993 Phaseolus vulgaris
Phvul.007G177700 5.0kb upstream 5.0kb upstream 8835 true Chr07: 29726994-29735828 Phaseolus vulgaris
Phvul.007G177700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 29730829-29735828 Phaseolus vulgaris
Phvul.007G177700 5.0kb downstream 5.0kb downstream 8835 true Chr07: 29721994-29730828 Phaseolus vulgaris
Phvul.007G177700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 29721994-29726993 Phaseolus vulgaris
Phvul.007G177700 10.0kb upstream 10.0kb upstream 13835 true Chr07: 29726994-29740828 Phaseolus vulgaris
Phvul.007G177700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 29730829-29740828 Phaseolus vulgaris
Phvul.007G177700 10.0kb downstream 10.0kb downstream 13835 true Chr07: 29716994-29730828 Phaseolus vulgaris
Phvul.007G177700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 29716994-29726993 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303909 5265 Fabidae View MSA
124070405 5270 Rosid View MSA
123742306 5271 Pentapetalae View MSA
122770258 5272 Eudicot View MSA
122049335 5273 Angiosperm View MSA
123429000 5275 Viridiplantae View MSA
121348814 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.316901 0.0 1.20503 Low Low
cufflinks 0.609102 0.0 2.19589    
cufflinks 2.18185 0.0 6.79408    
cufflinks 0.324734 0.0 1.24358 Low Low
cufflinks 1.41243 0.0 4.67902    
cufflinks 1.26379 0.0 4.21005    
cufflinks 2.78336 0.0 8.51809   High
cufflinks 4.27245 0.0 12.3225   High
cufflinks 1.57332 0.0 5.15511    
cufflinks 1.64858 0.0 5.3371    
cufflinks 0.670421 0.0 2.40974    

0 Strain