Gene : Phvul.007G178100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11467//PTHR11467:SF54 - HISTONE H1/H5 // SUBFAMILY NOT NAMED Genomic Order:  1642
Name:  ? Phvul.007G178100 Secondary Identifier:  ? PAC:37167010
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G178100 0.5kb upstream 0.5kb upstream 1933 true Chr07: 29808877-29810809 Phaseolus vulgaris
Phvul.007G178100 0.5kb upstream 0.5kb upstream 500 false Chr07: 29808877-29809376 Phaseolus vulgaris
Phvul.007G178100 0.5kb downstream 0.5kb downstream 1933 true Chr07: 29809377-29811309 Phaseolus vulgaris
Phvul.007G178100 0.5kb downstream 0.5kb downstream 500 false Chr07: 29810810-29811309 Phaseolus vulgaris
Phvul.007G178100 1.0kb upstream 1.0kb upstream 2433 true Chr07: 29808377-29810809 Phaseolus vulgaris
Phvul.007G178100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 29808377-29809376 Phaseolus vulgaris
Phvul.007G178100 1.0kb downstream 1.0kb downstream 2433 true Chr07: 29809377-29811809 Phaseolus vulgaris
Phvul.007G178100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 29810810-29811809 Phaseolus vulgaris
Phvul.007G178100 2.0kb upstream 2.0kb upstream 3433 true Chr07: 29807377-29810809 Phaseolus vulgaris
Phvul.007G178100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 29807377-29809376 Phaseolus vulgaris
Phvul.007G178100 2.0kb downstream 2.0kb downstream 3433 true Chr07: 29809377-29812809 Phaseolus vulgaris
Phvul.007G178100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 29810810-29812809 Phaseolus vulgaris
Phvul.007G178100 5.0kb upstream 5.0kb upstream 6433 true Chr07: 29804377-29810809 Phaseolus vulgaris
Phvul.007G178100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 29804377-29809376 Phaseolus vulgaris
Phvul.007G178100 5.0kb downstream 5.0kb downstream 6433 true Chr07: 29809377-29815809 Phaseolus vulgaris
Phvul.007G178100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 29810810-29815809 Phaseolus vulgaris
Phvul.007G178100 10.0kb upstream 10.0kb upstream 11433 true Chr07: 29799377-29810809 Phaseolus vulgaris
Phvul.007G178100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 29799377-29809376 Phaseolus vulgaris
Phvul.007G178100 10.0kb downstream 10.0kb downstream 11433 true Chr07: 29809377-29820809 Phaseolus vulgaris
Phvul.007G178100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 29810810-29820809 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303663 5265 Fabidae View MSA
124071858 5270 Rosid View MSA
123748921 5271 Pentapetalae View MSA
122797183 5272 Eudicot View MSA
122049683 5273 Angiosperm View MSA
121350617 5274 Embryophyte View MSA
123428771 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 370.86 0.0 1235.67 High  
cufflinks 468.504 0.0 1653.89 High  
cufflinks 295.015 0.0 946.147 High Low
cufflinks 516.878 0.0 1885.08 High High
cufflinks 473.807 0.0 1684.62 High  
cufflinks 455.992 0.0 1605.3 High  
cufflinks 254.372 0.0 806.819 High Low
cufflinks 305.172 0.0 992.847 High Low
cufflinks 424.636 0.0 1497.02 High  
cufflinks 407.803 0.0 1389.89 High  
cufflinks 488.103 0.0 1752.24 High  

0 Strain