Gene : Phvul.005G035900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11945//PTHR11945:SF237 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  355
Name:  ? Phvul.005G035900 Secondary Identifier:  ? PAC:37152461
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G035900 0.5kb upstream 0.5kb upstream 6882 true Chr05: 3360295-3367176 Phaseolus vulgaris
Phvul.005G035900 0.5kb upstream 0.5kb upstream 500 false Chr05: 3360295-3360794 Phaseolus vulgaris
Phvul.005G035900 0.5kb downstream 0.5kb downstream 6882 true Chr05: 3360795-3367676 Phaseolus vulgaris
Phvul.005G035900 0.5kb downstream 0.5kb downstream 500 false Chr05: 3367177-3367676 Phaseolus vulgaris
Phvul.005G035900 1.0kb upstream 1.0kb upstream 7382 true Chr05: 3359795-3367176 Phaseolus vulgaris
Phvul.005G035900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3359795-3360794 Phaseolus vulgaris
Phvul.005G035900 1.0kb downstream 1.0kb downstream 7382 true Chr05: 3360795-3368176 Phaseolus vulgaris
Phvul.005G035900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3367177-3368176 Phaseolus vulgaris
Phvul.005G035900 2.0kb upstream 2.0kb upstream 8382 true Chr05: 3358795-3367176 Phaseolus vulgaris
Phvul.005G035900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3358795-3360794 Phaseolus vulgaris
Phvul.005G035900 2.0kb downstream 2.0kb downstream 8382 true Chr05: 3360795-3369176 Phaseolus vulgaris
Phvul.005G035900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3367177-3369176 Phaseolus vulgaris
Phvul.005G035900 5.0kb upstream 5.0kb upstream 11382 true Chr05: 3355795-3367176 Phaseolus vulgaris
Phvul.005G035900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3355795-3360794 Phaseolus vulgaris
Phvul.005G035900 5.0kb downstream 5.0kb downstream 11382 true Chr05: 3360795-3372176 Phaseolus vulgaris
Phvul.005G035900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3367177-3372176 Phaseolus vulgaris
Phvul.005G035900 10.0kb upstream 10.0kb upstream 16382 true Chr05: 3350795-3367176 Phaseolus vulgaris
Phvul.005G035900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3350795-3360794 Phaseolus vulgaris
Phvul.005G035900 10.0kb downstream 10.0kb downstream 16382 true Chr05: 3360795-3377176 Phaseolus vulgaris
Phvul.005G035900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3367177-3377176 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305207 5265 Fabidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.180433 0.0 0.760265 Low  
cufflinks 0.267437 0.0 1.08967 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.140712 0.0 0.610193 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.086309 0.0 0.389986 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain