Gene : Phvul.007G176800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10302:SF0 - SINGLE-STRANDED DNA-BINDING PROTEIN, MITOCHONDRIAL Genomic Order:  1629
Name:  ? Phvul.007G176800 Secondary Identifier:  ? PAC:37164271
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G176800 0.5kb upstream 0.5kb upstream 3136 true Chr07: 29666036-29669171 Phaseolus vulgaris
Phvul.007G176800 0.5kb upstream 0.5kb upstream 500 false Chr07: 29668672-29669171 Phaseolus vulgaris
Phvul.007G176800 0.5kb downstream 0.5kb downstream 3136 true Chr07: 29665536-29668671 Phaseolus vulgaris
Phvul.007G176800 0.5kb downstream 0.5kb downstream 500 false Chr07: 29665536-29666035 Phaseolus vulgaris
Phvul.007G176800 1.0kb upstream 1.0kb upstream 3636 true Chr07: 29666036-29669671 Phaseolus vulgaris
Phvul.007G176800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 29668672-29669671 Phaseolus vulgaris
Phvul.007G176800 1.0kb downstream 1.0kb downstream 3636 true Chr07: 29665036-29668671 Phaseolus vulgaris
Phvul.007G176800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 29665036-29666035 Phaseolus vulgaris
Phvul.007G176800 2.0kb upstream 2.0kb upstream 4636 true Chr07: 29666036-29670671 Phaseolus vulgaris
Phvul.007G176800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 29668672-29670671 Phaseolus vulgaris
Phvul.007G176800 2.0kb downstream 2.0kb downstream 4636 true Chr07: 29664036-29668671 Phaseolus vulgaris
Phvul.007G176800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 29664036-29666035 Phaseolus vulgaris
Phvul.007G176800 5.0kb upstream 5.0kb upstream 7636 true Chr07: 29666036-29673671 Phaseolus vulgaris
Phvul.007G176800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 29668672-29673671 Phaseolus vulgaris
Phvul.007G176800 5.0kb downstream 5.0kb downstream 7636 true Chr07: 29661036-29668671 Phaseolus vulgaris
Phvul.007G176800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 29661036-29666035 Phaseolus vulgaris
Phvul.007G176800 10.0kb upstream 10.0kb upstream 12636 true Chr07: 29666036-29678671 Phaseolus vulgaris
Phvul.007G176800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 29668672-29678671 Phaseolus vulgaris
Phvul.007G176800 10.0kb downstream 10.0kb downstream 12636 true Chr07: 29656036-29668671 Phaseolus vulgaris
Phvul.007G176800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 29656036-29666035 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302373 5265 Fabidae View MSA
124070752 5270 Rosid View MSA
123745269 5271 Pentapetalae View MSA
122793973 5272 Eudicot View MSA
122048956 5273 Angiosperm View MSA
121345230 5274 Embryophyte View MSA
123425647 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.4173 0.0 76.2107    
cufflinks 31.0411 0.0 80.3581    
cufflinks 53.6011 0.0 139.207 High High
cufflinks 22.4169 0.0 58.5725    
cufflinks 26.5105 0.0 68.9202    
cufflinks 40.8549 0.0 105.628 High High
cufflinks 14.021 0.0 37.7039   Low
cufflinks 11.543 0.0 31.6615   Low
cufflinks 15.8715 0.0 42.2624    
cufflinks 25.5694 0.0 66.5302    
cufflinks 27.7716 0.0 72.045    

0 Strain