Gene : Phvul.005G033400 P. vulgaris v2.1
Genomic Order:  328 Name:  ? Phvul.005G033400
Secondary Identifier:  ? PAC:37153361
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G033400 0.5kb upstream 0.5kb upstream 3611 true Chr05: 3060258-3063868 Phaseolus vulgaris
Phvul.005G033400 0.5kb upstream 0.5kb upstream 500 false Chr05: 3060258-3060757 Phaseolus vulgaris
Phvul.005G033400 0.5kb downstream 0.5kb downstream 3611 true Chr05: 3060758-3064368 Phaseolus vulgaris
Phvul.005G033400 0.5kb downstream 0.5kb downstream 500 false Chr05: 3063869-3064368 Phaseolus vulgaris
Phvul.005G033400 1.0kb upstream 1.0kb upstream 4111 true Chr05: 3059758-3063868 Phaseolus vulgaris
Phvul.005G033400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3059758-3060757 Phaseolus vulgaris
Phvul.005G033400 1.0kb downstream 1.0kb downstream 4111 true Chr05: 3060758-3064868 Phaseolus vulgaris
Phvul.005G033400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3063869-3064868 Phaseolus vulgaris
Phvul.005G033400 2.0kb upstream 2.0kb upstream 5111 true Chr05: 3058758-3063868 Phaseolus vulgaris
Phvul.005G033400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3058758-3060757 Phaseolus vulgaris
Phvul.005G033400 2.0kb downstream 2.0kb downstream 5111 true Chr05: 3060758-3065868 Phaseolus vulgaris
Phvul.005G033400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3063869-3065868 Phaseolus vulgaris
Phvul.005G033400 5.0kb upstream 5.0kb upstream 8111 true Chr05: 3055758-3063868 Phaseolus vulgaris
Phvul.005G033400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3055758-3060757 Phaseolus vulgaris
Phvul.005G033400 5.0kb downstream 5.0kb downstream 8111 true Chr05: 3060758-3068868 Phaseolus vulgaris
Phvul.005G033400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3063869-3068868 Phaseolus vulgaris
Phvul.005G033400 10.0kb upstream 10.0kb upstream 13111 true Chr05: 3050758-3063868 Phaseolus vulgaris
Phvul.005G033400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3050758-3060757 Phaseolus vulgaris
Phvul.005G033400 10.0kb downstream 10.0kb downstream 13111 true Chr05: 3060758-3073868 Phaseolus vulgaris
Phvul.005G033400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3063869-3073868 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312280 5265 Fabidae View MSA
124068196 5270 Rosid View MSA
123749169 5271 Pentapetalae View MSA
122787742 5272 Eudicot View MSA
122044964 5273 Angiosperm View MSA
121310373 5274 Embryophyte View MSA
123347874 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.2362 0.0 31.7611    
cufflinks 6.01091 0.0 18.2522    
cufflinks 17.4965 0.0 47.7671   High
cufflinks 7.73391 0.0 22.7012    
cufflinks 5.85839 0.0 17.8934    
cufflinks 11.1024 0.0 31.4834    
cufflinks 2.39694 0.0 8.00681   Low
cufflinks 3.47767 0.0 11.1879    
cufflinks 2.55288 0.0 8.46972   Low
cufflinks 5.21774 0.0 16.1428    
cufflinks 6.62256 0.0 19.8624    

0 Strain