Gene : Phvul.005G034400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23334 - CCAAT/ENHANCER BINDING PROTEIN Genomic Order:  338
Name:  ? Phvul.005G034400 Secondary Identifier:  ? PAC:37152463
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G034400 0.5kb upstream 0.5kb upstream 2382 true Chr05: 3200897-3203278 Phaseolus vulgaris
Phvul.005G034400 0.5kb upstream 0.5kb upstream 500 false Chr05: 3202779-3203278 Phaseolus vulgaris
Phvul.005G034400 0.5kb downstream 0.5kb downstream 2382 true Chr05: 3200397-3202778 Phaseolus vulgaris
Phvul.005G034400 0.5kb downstream 0.5kb downstream 500 false Chr05: 3200397-3200896 Phaseolus vulgaris
Phvul.005G034400 1.0kb upstream 1.0kb upstream 2882 true Chr05: 3200897-3203778 Phaseolus vulgaris
Phvul.005G034400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3202779-3203778 Phaseolus vulgaris
Phvul.005G034400 1.0kb downstream 1.0kb downstream 2882 true Chr05: 3199897-3202778 Phaseolus vulgaris
Phvul.005G034400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3199897-3200896 Phaseolus vulgaris
Phvul.005G034400 2.0kb upstream 2.0kb upstream 3882 true Chr05: 3200897-3204778 Phaseolus vulgaris
Phvul.005G034400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3202779-3204778 Phaseolus vulgaris
Phvul.005G034400 2.0kb downstream 2.0kb downstream 3882 true Chr05: 3198897-3202778 Phaseolus vulgaris
Phvul.005G034400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3198897-3200896 Phaseolus vulgaris
Phvul.005G034400 5.0kb upstream 5.0kb upstream 6882 true Chr05: 3200897-3207778 Phaseolus vulgaris
Phvul.005G034400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3202779-3207778 Phaseolus vulgaris
Phvul.005G034400 5.0kb downstream 5.0kb downstream 6882 true Chr05: 3195897-3202778 Phaseolus vulgaris
Phvul.005G034400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3195897-3200896 Phaseolus vulgaris
Phvul.005G034400 10.0kb upstream 10.0kb upstream 11882 true Chr05: 3200897-3212778 Phaseolus vulgaris
Phvul.005G034400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3202779-3212778 Phaseolus vulgaris
Phvul.005G034400 10.0kb downstream 10.0kb downstream 11882 true Chr05: 3190897-3202778 Phaseolus vulgaris
Phvul.005G034400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3190897-3200896 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306358 5265 Fabidae View MSA
124070072 5270 Rosid View MSA
123749570 5271 Pentapetalae View MSA
122773209 5272 Eudicot View MSA
122050154 5273 Angiosperm View MSA
121349674 5274 Embryophyte View MSA
123381395 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.44477 0.0 27.3448    
cufflinks 6.25847 0.0 25.0697    
cufflinks 12.6794 0.0 43.5465   High
cufflinks 3.16261 0.0 13.1453   Low
cufflinks 5.89256 0.0 20.8391    
cufflinks 4.53178 0.0 16.7781    
cufflinks 4.85462 0.0 18.2781    
cufflinks 9.88271 0.0 30.8374    
cufflinks 3.02121 0.0 12.4509   Low
cufflinks 22.1431 0.0 71.2357   High
cufflinks 4.84875 0.0 17.8707    

0 Strain