Gene : Phvul.005G034600 P. vulgaris v2.1
Defline:  (1 of 20) 1.1.1.195 - Cinnamyl-alcohol dehydrogenase / CAD Genomic Order:  340
Name:  ? Phvul.005G034600 Secondary Identifier:  ? PAC:37153624
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-361 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G034600 0.5kb upstream 0.5kb upstream 3037 true Chr05: 3217790-3220826 Phaseolus vulgaris
Phvul.005G034600 0.5kb upstream 0.5kb upstream 500 false Chr05: 3220327-3220826 Phaseolus vulgaris
Phvul.005G034600 0.5kb downstream 0.5kb downstream 3037 true Chr05: 3217290-3220326 Phaseolus vulgaris
Phvul.005G034600 0.5kb downstream 0.5kb downstream 500 false Chr05: 3217290-3217789 Phaseolus vulgaris
Phvul.005G034600 1.0kb upstream 1.0kb upstream 3537 true Chr05: 3217790-3221326 Phaseolus vulgaris
Phvul.005G034600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3220327-3221326 Phaseolus vulgaris
Phvul.005G034600 1.0kb downstream 1.0kb downstream 3537 true Chr05: 3216790-3220326 Phaseolus vulgaris
Phvul.005G034600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3216790-3217789 Phaseolus vulgaris
Phvul.005G034600 2.0kb upstream 2.0kb upstream 4537 true Chr05: 3217790-3222326 Phaseolus vulgaris
Phvul.005G034600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3220327-3222326 Phaseolus vulgaris
Phvul.005G034600 2.0kb downstream 2.0kb downstream 4537 true Chr05: 3215790-3220326 Phaseolus vulgaris
Phvul.005G034600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3215790-3217789 Phaseolus vulgaris
Phvul.005G034600 5.0kb upstream 5.0kb upstream 7537 true Chr05: 3217790-3225326 Phaseolus vulgaris
Phvul.005G034600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3220327-3225326 Phaseolus vulgaris
Phvul.005G034600 5.0kb downstream 5.0kb downstream 7537 true Chr05: 3212790-3220326 Phaseolus vulgaris
Phvul.005G034600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3212790-3217789 Phaseolus vulgaris
Phvul.005G034600 10.0kb upstream 10.0kb upstream 12537 true Chr05: 3217790-3230326 Phaseolus vulgaris
Phvul.005G034600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3220327-3230326 Phaseolus vulgaris
Phvul.005G034600 10.0kb downstream 10.0kb downstream 12537 true Chr05: 3207790-3220326 Phaseolus vulgaris
Phvul.005G034600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3207790-3217789 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315756 5265 Fabidae View MSA
124072658 5270 Rosid View MSA
123749871 5271 Pentapetalae View MSA
122798457 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 238.072 0.0 718.195 High High
cufflinks 80.4373 0.0 214.437 High  
cufflinks 48.3644 0.0 125.624 High  
cufflinks 45.4478 0.0 117.676 High  
cufflinks 88.5187 0.0 237.553 High  
cufflinks 99.6639 0.0 270.503 High  
cufflinks 116.147 0.0 319.631 High  
cufflinks 63.2173 0.0 166.072 High  
cufflinks 190.333 0.0 552.916 High  
cufflinks 7.76014 0.0 21.9896   Low
cufflinks 134.949 0.0 376.833 High  

0 Strain