Gene : Phvul.005G034633 P. vulgaris v2.1
Defline:  (1 of 20) 1.1.1.195 - Cinnamyl-alcohol dehydrogenase / CAD Genomic Order:  341
Name:  ? Phvul.005G034633 Secondary Identifier:  ? PAC:37152726
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-361 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G034633 0.5kb upstream 0.5kb upstream 5050 true Chr05: 3233955-3239004 Phaseolus vulgaris
Phvul.005G034633 0.5kb upstream 0.5kb upstream 500 false Chr05: 3238505-3239004 Phaseolus vulgaris
Phvul.005G034633 0.5kb downstream 0.5kb downstream 5050 true Chr05: 3233455-3238504 Phaseolus vulgaris
Phvul.005G034633 0.5kb downstream 0.5kb downstream 500 false Chr05: 3233455-3233954 Phaseolus vulgaris
Phvul.005G034633 1.0kb upstream 1.0kb upstream 5550 true Chr05: 3233955-3239504 Phaseolus vulgaris
Phvul.005G034633 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3238505-3239504 Phaseolus vulgaris
Phvul.005G034633 1.0kb downstream 1.0kb downstream 5550 true Chr05: 3232955-3238504 Phaseolus vulgaris
Phvul.005G034633 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3232955-3233954 Phaseolus vulgaris
Phvul.005G034633 2.0kb upstream 2.0kb upstream 6550 true Chr05: 3233955-3240504 Phaseolus vulgaris
Phvul.005G034633 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3238505-3240504 Phaseolus vulgaris
Phvul.005G034633 2.0kb downstream 2.0kb downstream 6550 true Chr05: 3231955-3238504 Phaseolus vulgaris
Phvul.005G034633 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3231955-3233954 Phaseolus vulgaris
Phvul.005G034633 5.0kb upstream 5.0kb upstream 9550 true Chr05: 3233955-3243504 Phaseolus vulgaris
Phvul.005G034633 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3238505-3243504 Phaseolus vulgaris
Phvul.005G034633 5.0kb downstream 5.0kb downstream 9550 true Chr05: 3228955-3238504 Phaseolus vulgaris
Phvul.005G034633 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3228955-3233954 Phaseolus vulgaris
Phvul.005G034633 10.0kb upstream 10.0kb upstream 14550 true Chr05: 3233955-3248504 Phaseolus vulgaris
Phvul.005G034633 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3238505-3248504 Phaseolus vulgaris
Phvul.005G034633 10.0kb downstream 10.0kb downstream 14550 true Chr05: 3223955-3238504 Phaseolus vulgaris
Phvul.005G034633 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3223955-3233954 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315756 5265 Fabidae View MSA
124072658 5270 Rosid View MSA
123749871 5271 Pentapetalae View MSA
122798457 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.57764 0.0 11.021    
cufflinks 6.59802 0.0 19.0334    
cufflinks 0.184008 0.0 0.754144 Low  
cufflinks 7.79663 0.0 22.1128    
cufflinks 5.97022 0.0 17.4477    
cufflinks 14.6328 0.0 39.2658   High
cufflinks 0.401406 0.0 1.5439 Low  
cufflinks 0.380794 0.0 1.46992 Low  
cufflinks 0.0313238 0.0 0.152144 Low Low
cufflinks 0.0273822 0.0 0.135159 Low Low
cufflinks 24.5373 0.0 63.8992   High

0 Strain