Gene : Phvul.005G034500 P. vulgaris v2.1
Defline:  (1 of 20) 1.1.1.195 - Cinnamyl-alcohol dehydrogenase / CAD Genomic Order:  339
Name:  ? Phvul.005G034500 Secondary Identifier:  ? PAC:37154395
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-361 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G034500 0.5kb upstream 0.5kb upstream 6028 true Chr05: 3203790-3209817 Phaseolus vulgaris
Phvul.005G034500 0.5kb upstream 0.5kb upstream 500 false Chr05: 3209318-3209817 Phaseolus vulgaris
Phvul.005G034500 0.5kb downstream 0.5kb downstream 6028 true Chr05: 3203290-3209317 Phaseolus vulgaris
Phvul.005G034500 0.5kb downstream 0.5kb downstream 500 false Chr05: 3203290-3203789 Phaseolus vulgaris
Phvul.005G034500 1.0kb upstream 1.0kb upstream 6528 true Chr05: 3203790-3210317 Phaseolus vulgaris
Phvul.005G034500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3209318-3210317 Phaseolus vulgaris
Phvul.005G034500 1.0kb downstream 1.0kb downstream 6528 true Chr05: 3202790-3209317 Phaseolus vulgaris
Phvul.005G034500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3202790-3203789 Phaseolus vulgaris
Phvul.005G034500 2.0kb upstream 2.0kb upstream 7528 true Chr05: 3203790-3211317 Phaseolus vulgaris
Phvul.005G034500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3209318-3211317 Phaseolus vulgaris
Phvul.005G034500 2.0kb downstream 2.0kb downstream 7528 true Chr05: 3201790-3209317 Phaseolus vulgaris
Phvul.005G034500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3201790-3203789 Phaseolus vulgaris
Phvul.005G034500 5.0kb upstream 5.0kb upstream 10528 true Chr05: 3203790-3214317 Phaseolus vulgaris
Phvul.005G034500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3209318-3214317 Phaseolus vulgaris
Phvul.005G034500 5.0kb downstream 5.0kb downstream 10528 true Chr05: 3198790-3209317 Phaseolus vulgaris
Phvul.005G034500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3198790-3203789 Phaseolus vulgaris
Phvul.005G034500 10.0kb upstream 10.0kb upstream 15528 true Chr05: 3203790-3219317 Phaseolus vulgaris
Phvul.005G034500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3209318-3219317 Phaseolus vulgaris
Phvul.005G034500 10.0kb downstream 10.0kb downstream 15528 true Chr05: 3193790-3209317 Phaseolus vulgaris
Phvul.005G034500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3193790-3203789 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306764 5265 Fabidae View MSA
124067100 5270 Rosid View MSA
123752094 5271 Pentapetalae View MSA
122797549 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.1421 0.0 70.4059    
cufflinks 12.6649 0.0 34.4423    
cufflinks 29.6106 0.0 76.6388   High
cufflinks 41.1482 0.0 106.377 High High
cufflinks 21.8747 0.0 57.2873    
cufflinks 14.668 0.0 39.3901    
cufflinks 9.13293 0.0 25.601   Low
cufflinks 10.5183 0.0 28.9922   Low
cufflinks 16.6472 0.0 44.4368    
cufflinks 16.8476 0.0 44.7688    
cufflinks 17.9894 0.0 47.6997    

0 Strain