Gene : Phvul.005G034700 P. vulgaris v2.1
Defline:  (1 of 20) 1.1.1.195 - Cinnamyl-alcohol dehydrogenase / CAD Genomic Order:  343
Name:  ? Phvul.005G034700 Secondary Identifier:  ? PAC:37152322
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-361 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G034700 0.5kb upstream 0.5kb upstream 3575 true Chr05: 3253459-3257033 Phaseolus vulgaris
Phvul.005G034700 0.5kb upstream 0.5kb upstream 500 false Chr05: 3256534-3257033 Phaseolus vulgaris
Phvul.005G034700 0.5kb downstream 0.5kb downstream 3575 true Chr05: 3252959-3256533 Phaseolus vulgaris
Phvul.005G034700 0.5kb downstream 0.5kb downstream 500 false Chr05: 3252959-3253458 Phaseolus vulgaris
Phvul.005G034700 1.0kb upstream 1.0kb upstream 4075 true Chr05: 3253459-3257533 Phaseolus vulgaris
Phvul.005G034700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3256534-3257533 Phaseolus vulgaris
Phvul.005G034700 1.0kb downstream 1.0kb downstream 4075 true Chr05: 3252459-3256533 Phaseolus vulgaris
Phvul.005G034700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3252459-3253458 Phaseolus vulgaris
Phvul.005G034700 2.0kb upstream 2.0kb upstream 5075 true Chr05: 3253459-3258533 Phaseolus vulgaris
Phvul.005G034700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3256534-3258533 Phaseolus vulgaris
Phvul.005G034700 2.0kb downstream 2.0kb downstream 5075 true Chr05: 3251459-3256533 Phaseolus vulgaris
Phvul.005G034700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3251459-3253458 Phaseolus vulgaris
Phvul.005G034700 5.0kb upstream 5.0kb upstream 8075 true Chr05: 3253459-3261533 Phaseolus vulgaris
Phvul.005G034700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3256534-3261533 Phaseolus vulgaris
Phvul.005G034700 5.0kb downstream 5.0kb downstream 8075 true Chr05: 3248459-3256533 Phaseolus vulgaris
Phvul.005G034700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3248459-3253458 Phaseolus vulgaris
Phvul.005G034700 10.0kb upstream 10.0kb upstream 13075 true Chr05: 3253459-3266533 Phaseolus vulgaris
Phvul.005G034700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3256534-3266533 Phaseolus vulgaris
Phvul.005G034700 10.0kb downstream 10.0kb downstream 13075 true Chr05: 3243459-3256533 Phaseolus vulgaris
Phvul.005G034700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3243459-3253458 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315756 5265 Fabidae View MSA
124072658 5270 Rosid View MSA
123749871 5271 Pentapetalae View MSA
122798457 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.42723 0.0 7.92713    
cufflinks 4.36619 0.0 13.3324    
cufflinks 3.07501 0.0 9.74951    
cufflinks 10.7472 0.0 29.8796    
cufflinks 15.2348 0.0 41.0735    
cufflinks 8.75689 0.0 24.761    
cufflinks 43.3227 0.0 112.018 High  
cufflinks 29.8595 0.0 77.4418 High  
cufflinks 63.1831 0.0 164.865 High High
cufflinks 0.0898492 0.0 0.395763 Low Low
cufflinks 19.3944 0.0 51.3732    

0 Strain