Gene : Phvul.005G034800 P. vulgaris v2.1
Defline:  (1 of 20) 1.1.1.195 - Cinnamyl-alcohol dehydrogenase / CAD Genomic Order:  344
Name:  ? Phvul.005G034800 Secondary Identifier:  ? PAC:37153682
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-361 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G034800 0.5kb upstream 0.5kb upstream 2703 true Chr05: 3262228-3264930 Phaseolus vulgaris
Phvul.005G034800 0.5kb upstream 0.5kb upstream 500 false Chr05: 3264431-3264930 Phaseolus vulgaris
Phvul.005G034800 0.5kb downstream 0.5kb downstream 2703 true Chr05: 3261728-3264430 Phaseolus vulgaris
Phvul.005G034800 0.5kb downstream 0.5kb downstream 500 false Chr05: 3261728-3262227 Phaseolus vulgaris
Phvul.005G034800 1.0kb upstream 1.0kb upstream 3203 true Chr05: 3262228-3265430 Phaseolus vulgaris
Phvul.005G034800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3264431-3265430 Phaseolus vulgaris
Phvul.005G034800 1.0kb downstream 1.0kb downstream 3203 true Chr05: 3261228-3264430 Phaseolus vulgaris
Phvul.005G034800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3261228-3262227 Phaseolus vulgaris
Phvul.005G034800 2.0kb upstream 2.0kb upstream 4203 true Chr05: 3262228-3266430 Phaseolus vulgaris
Phvul.005G034800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3264431-3266430 Phaseolus vulgaris
Phvul.005G034800 2.0kb downstream 2.0kb downstream 4203 true Chr05: 3260228-3264430 Phaseolus vulgaris
Phvul.005G034800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3260228-3262227 Phaseolus vulgaris
Phvul.005G034800 5.0kb upstream 5.0kb upstream 7203 true Chr05: 3262228-3269430 Phaseolus vulgaris
Phvul.005G034800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3264431-3269430 Phaseolus vulgaris
Phvul.005G034800 5.0kb downstream 5.0kb downstream 7203 true Chr05: 3257228-3264430 Phaseolus vulgaris
Phvul.005G034800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3257228-3262227 Phaseolus vulgaris
Phvul.005G034800 10.0kb upstream 10.0kb upstream 12203 true Chr05: 3262228-3274430 Phaseolus vulgaris
Phvul.005G034800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3264431-3274430 Phaseolus vulgaris
Phvul.005G034800 10.0kb downstream 10.0kb downstream 12203 true Chr05: 3252228-3264430 Phaseolus vulgaris
Phvul.005G034800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3252228-3262227 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315756 5265 Fabidae View MSA
124072658 5270 Rosid View MSA
123749871 5271 Pentapetalae View MSA
122798457 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.0255 0.0 98.3002 High  
cufflinks 28.2722 0.0 73.2671    
cufflinks 390.833 0.0 1286.06 High High
cufflinks 103.809 0.0 281.698 High  
cufflinks 125.6 0.0 347.466 High  
cufflinks 105.964 0.0 289.207 High  
cufflinks 22.4299 0.0 58.5886    
cufflinks 9.52447 0.0 26.4471   Low
cufflinks 24.9347 0.0 64.9001    
cufflinks 17.5761 0.0 46.5499    
cufflinks 86.5954 0.0 231.644 High  

0 Strain